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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100819899   protein CHUP1, chloroplastic 
 gma-r.7   100819899   protein CHUP1, chloroplastic 
 gma-m.5   100819899   protein CHUP1, chloroplastic 
 gma-u.5   100796238   protein CHUP1, chloroplastic 
 gma-u.5   100781632   protein CHUP1, chloroplastic 
 mtr-u.5   11432947   protein CHUP1, chloroplastic 
 mtr-u.5   11418904   protein CHUP1, chloroplastic 
 ppo-u.5   18110911   protein CHUP1, chloroplastic 
 ppo-u.5   7475109   protein CHUP1, chloroplastic 
 ath-u.5   AR791   actin binding protein family 
 vvi-u.5   100265175   protein CHUP1, chloroplastic 
 sly-u.5   101266235   protein CHUP1, chloroplastic-like 
 sly-u.5   101252567   protein CHUP1, chloroplastic 
 osa-u.5   4338004   protein CHUP1, chloroplastic 
 zma-u.5   103630113   protein CHUP1, chloroplastic 

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Top 50 coexpressed genes to 100819899 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100819899 (gma-u.5 coexpression data)

CoexMap"100819899"


gmaLOC100819899 | Entrez gene ID : 100819899      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 5 2 2 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009658 [list] [network] chloroplast organization  (139 genes)  IEA  
GO CC
GO:0009707 [list] [network] chloroplast outer membrane  (63 genes)  IEA  
GO MF
Protein XP_003546609.1 [sequence] [blastp]
XP_014623728.1 [sequence] [blastp]
XP_040865722.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 2,  E.R. 2,  cysk_nucl 1,  cyto 1,  mito 1,  extr 1  (predict for XP_003546609.1)
chlo 3,  nucl 2,  E.R. 2,  cysk_nucl 1,  cyto 1,  mito 1,  extr 1  (predict for XP_014623728.1)
nucl 6,  chlo 1,  mito 1,  plas 1,  E.R. 1,  cysk 1,  chlo_mito 1,  cysk_plas 1,  E.R._plas 1,  mito_plas 1  (predict for XP_040865722.1)
Subcellular
localization
TargetP
scret 3  (predict for XP_003546609.1)
scret 3  (predict for XP_014623728.1)
scret 2  (predict for XP_040865722.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100819899

.
gma-r.7
for
100819899

.
gma-m.5
for
100819899

.
gma-u.5
for
100796238

.
gma-u.5
for
100781632

.
mtr-u.5
for
11432947

.
mtr-u.5
for
11418904

.
ppo-u.5
for
18110911

.
ppo-u.5
for
7475109

.
ath-u.5
for
AR791

.
vvi-u.5
for
100265175

.
sly-u.5
for
101266235

.
sly-u.5
for
101252567

.
osa-u.5
for
4338004

.
zma-u.5
for
103630113

.


Ortholog ID: 5426
Species ath gma gma sly sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot sot cit bdi nta
Symbol AR791 LOC100781632 LOC100796238 LOC101266235 LOC101252567 LOC4338004 LOC103630113 LOC103868518 LOC103832813 LOC100265175 LOC7475109 LOC18110911 LOC11418904 LOC11432947 LOC123041026 LOC123115267 LOC123427214 LOC107937283 LOC107937323 LOC106422035 LOC106360476 LOC8055696 LOC102583231 LOC102602452 LOC102616619 LOC100834002 LOC107769164
Function* actin binding protein family protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic-like protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic-like protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic-like protein CHUP1, chloroplastic-like protein CHUP1, chloroplastic protein CHUP1, chloroplastic-like protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 3
bra00350 Tyrosine metabolism 2
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ppo01230 Biosynthesis of amino acids 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 4
mtr00230 Purine metabolism 3
mtr00240 Pyrimidine metabolism 3
mtr01232 Nucleotide metabolism 3
mtr01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 2
tae00565 Ether lipid metabolism 2
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 6
hvu04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
sot04016 MAPK signaling pathway - plant 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 5
nta00564 Glycerophospholipid metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta00073 Cutin, suberine and wax biosynthesis 2
nta04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841637 100781632 100796238 101266235 101252567 4338004 103630113 103868518 103832813 100265175 7475109 18110911 11418904 11432947 123041026 123115267 123427214 107937283 107937323 106422035 106360476 8055696 102583231 102602452 102616619 100834002 107769164
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