ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	106794958	thaumatin-like protein 1b
gma-r.7	106794958	thaumatin-like protein 1b
gma-u.5	100808305	pathogenesis-related thaumatin-like protein 3.5
gma-u.5	100806478	pathogenesis-related thaumatin-like protein 3.5
mtr-u.5	11424121	pathogenesis-related thaumatin-like protein 3.5
mtr-u.5	11428091	thaumatin-like protein 1
ppo-u.5	18094931	thaumatin-like protein 1
ppo-u.5	7479328	osmotin-like protein OSM34
ppo-u.5	7477685	thaumatin-like protein 1
ath-u.5	AT4G36010	Pathogenesis-related thaumatin superfamily protein
ath-u.5	AT4G38660	Pathogenesis-related thaumatin superfamily protein
bra-r.6	103835851	pathogenesis-related thaumatin-like protein 3.5
bra-r.6	103842652	pathogenesis-related protein 5
vvi-u.5	100247111	uncharacterized LOC100247111
vvi-u.5	100244461	thaumatin-like protein
ghi-r.1	107905398	pathogenesis-related thaumatin-like protein 3.5
ghi-r.1	107905512	pathogenesis-related thaumatin-like protein 3.5
ghi-r.1	107905514	thaumatin-like protein 1
bna-r.1	125607905	thaumatin-like protein 1b
bna-r.1	106361535	thaumatin-like protein 1
bna-r.1	106361955	pathogenesis-related thaumatin-like protein 3.5
cit-r.1	102607823	thaumatin-like protein 1b
cit-r.1	102578041	thaumatin-like protein
sly-u.5	101264452	osmotin-like protein OSML13
sly-u.5	101264959	pathogenesis-related protein PR-5
sot-r.1	102586424	osmotin-like protein OSML15
nta-r.1	107811874	pathogenesis-related thaumatin-like protein 3.5
nta-r.1	107772607	pathogenesis-related thaumatin-like protein 3.5
nta-r.1	107769944	thaumatin-like protein
osa-u.5	9272385	thaumatin-like protein 1
osa-u.5	4332163	pathogenesis-related thaumatin-like protein 3.5
zma-u.5	542299	stress-induced protein 1
zma-u.5	100193461	putative thaumatin domain family protein
tae-r.2	123123453	thaumatin-like protein 1b
hvu-r.1	123397572	thaumatin-like protein 1
sbi-r.1	8078857	thaumatin-like protein 1b
sbi-r.1	8066008	thaumatin-like protein 1b
bdi-r.1	100844611	thaumatin-like protein 1
bdi-r.1	100835911	pathogenesis-related protein 5

Top 50 coexpressed genes to 106794958 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106794958 (gma-u.5 coexpression data)

CoexMap"106794958"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006952 [list] [network] defense response

(700 genes)

IEA

GO CC

GO:0005576 [list] [network] extracellular region

(538 genes)

IEA

GO MF

Protein

XP_014618505.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 6, chlo 4

(predict for XP_014618505.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_014618505.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 106794958	gma-r.7 for 106794958	gma-u.5 for 100808305	gma-u.5 for 100806478	mtr-u.5 for 11424121	mtr-u.5 for 11428091	ppo-u.5 for 18094931	ppo-u.5 for 7479328	ppo-u.5 for 7477685	ath-u.5 for AT4G36010	ath-u.5 for AT4G38660	bra-r.6 for 103835851	bra-r.6 for 103842652	vvi-u.5 for 100247111	vvi-u.5 for 100244461	ghi-r.1 for 107905398	ghi-r.1 for 107905512	ghi-r.1 for 107905514	bna-r.1 for 125607905	bna-r.1 for 106361535	bna-r.1 for 106361955	cit-r.1 for 102607823	cit-r.1 for 102578041	sly-u.5 for 101264452	sly-u.5 for 101264959	sot-r.1 for 102586424	nta-r.1 for 107811874	nta-r.1 for 107772607	nta-r.1 for 107769944	osa-u.5 for 9272385	osa-u.5 for 4332163	zma-u.5 for 542299	zma-u.5 for 100193461	tae-r.2 for 123123453	hvu-r.1 for 123397572	sbi-r.1 for 8078857	sbi-r.1 for 8066008	bdi-r.1 for 100844611	bdi-r.1 for 100835911

Ortholog

Ortholog ID: 30

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

TLP-3

Function^*

thaumatin-like protein 1

protein P21

thaumatin-like protein 1

thaumatin-like protein 1b

osmotin-like protein OSM34

thaumatin-like protein 1

thaumatin-like protein 1b

Pathogenesis-related thaumatin superfamily protein

thaumatin-like protein 3

thaumatin-like protein 1

thaumatin-like protein 1b

thaumatin-like protein

protein P21

thaumatin-like protein

thaumatin-like protein 1

pathogenesis-related protein 5-like

protein P21-like

thaumatin-like protein 1

thaumatin-like protein 1b

thaumatin-like protein

pathogenesis-related thaumatin-like protein 3.5

osmotin-like protein OSML81

pathogenesis-related protein R major form

pathogenesis-related thaumatin-like protein 3.5

protein P21

pathogenesis-related protein R major form

thaumatin-like protein 1

putative thaumatin domain family protein

Protein P21

protein P21

thaumatin-like protein 1

pathogenesis-related 5 protein Cup a 3-like

thaumatin-like protein 1b

thaumatin-like protein 1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	4
ppo00480	Glutathione metabolism	3
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo04075	Plant hormone signal transduction	2
ppo00901	Indole alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00909	Sesquiterpenoid and triterpenoid biosynthesis	5
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	4
vvi04626	Plant-pathogen interaction	4
vvi00520	Amino sugar and nucleotide sugar metabolism	3
vvi00480	Glutathione metabolism	3
vvi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00520	Amino sugar and nucleotide sugar metabolism	2
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	3
sly04142	Lysosome	3
sly04145	Phagosome	3
sly04144	Endocytosis	2
sly04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	3
sot04075	Plant hormone signal transduction	3
sot04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00904	Diterpenoid biosynthesis	2
nta00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	8
nta04626	Plant-pathogen interaction	7
nta04075	Plant hormone signal transduction	6
nta00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	3
zma00520	Amino sugar and nucleotide sugar metabolism	3
zma04075	Plant hormone signal transduction	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00909	Sesquiterpenoid and triterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04016	MAPK signaling pathway - plant	6
hvu04075	Plant hormone signal transduction	5
hvu04626	Plant-pathogen interaction	5

Expression

Expression pattern

Entrez Gene ID^*

100815652

11436800

25492788

25492789

7479328

7470389

7490640

829757

843841

103860762

103844371

100264253

100259841

100249610

107947008

121203468

106355231

106449414

102621968

102622795

102622492

104645134

101261870

102585092

102594304

107807243

107805712

107776518

4347700

100274734

100281135

103626019

123160584

123395625

8078857

100841264

The preparation time of this page was 0.4 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	2	2	2	3	3	2	2	1	3	2	2	1	1	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106794958 (gma-u.5 coexpression data)

Top 50 enrichment test to 106794958 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**