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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5  PM29  seed maturation protein 
 gma-r.7  PM29  seed maturation protein 
 gma-m.5  PM29  seed maturation protein 
 gma-u.5  PM16  seed maturation protein 
 mtr-u.5  11409833  late embryogenesis abundant protein 6 
 ath-u.5  LEA18  Late embryogenesis abundant protein, group 1 protein 
 bra-r.6  103867375  late embryogenesis abundant protein 18 
 bna-r.1  BNAC04G09820D  late embryogenesis abundant protein 18 
 bna-r.1  106351779  late embryogenesis abundant protein 6-like 
 cit-r.1  102619235  late embryogenesis abundant protein 6 
 tae-r.2  123151638  late embryogenesis abundant protein 6-like 
 tae-r.2  123151319  late embryogenesis abundant protein 6 
 tae-r.2  123151220  uncharacterized LOC123151220 
 hvu-r.1  123411716  late embryogenesis abundant protein 6-like 
 hvu-r.1  123411140  late embryogenesis abundant protein 6-like 
 hvu-r.1  123410998  uncharacterized LOC123410998 
 bdi-r.1  100833759  late embryogenesis abundant protein 6 

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Top 50 coexpressed genes to PM29 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PM29 (gma-u.5 coexpression data)

CoexMap"548096"


gmaPM29 | Entrez gene ID : 548096
Species gma mtr ath bra bna cit tae hvu bdi sbi osa sot sly ppo vvi ghi zma cre nta
Paralog 4 1 1 1 2 1 3 3 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (30 genes)  IEA  
GO CC
GO MF
Protein NP_001234942.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  nucl 4  (predict for NP_001234942.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001234942.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

gma-u.5
for
PM29


gma-r.7
for
PM29


gma-m.5
for
PM29


gma-u.5
for
PM16


mtr-u.5
for
11409833


ath-u.5
for
LEA18


bra-r.6
for
103867375


bna-r.1
for
BNAC04G09820D


bna-r.1
for
106351779


cit-r.1
for
102619235


tae-r.2
for
123151638


tae-r.2
for
123151319


tae-r.2
for
123151220


hvu-r.1
for
123411716


hvu-r.1
for
123411140


hvu-r.1
for
123410998


bdi-r.1
for
100833759



Ortholog ID: 3212
Species gma gma mtr ath bra bna bna cit tae tae tae hvu hvu hvu bdi
Symbol PM29 PM16 LOC11409833 LEA18 LOC103867375 LOC111211095 LOC106414888 LOC102619235 LOC123151638 LOC123152653 LOC123169284 LOC123411716 LOC123410998 LOC123410719 LOC100833759
Function* seed maturation protein seed maturation protein late embryogenesis abundant protein 6 Late embryogenesis abundant protein, group 1 protein late embryogenesis abundant protein 18 late embryogenesis abundant protein 18-like late embryogenesis abundant protein 18-like late embryogenesis abundant protein 6 late embryogenesis abundant protein 6-like late embryogenesis abundant protein 6 uncharacterized LOC123169284 late embryogenesis abundant protein 6-like uncharacterized LOC123410998 late embryogenesis abundant protein 6-like late embryogenesis abundant protein 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01040 Biosynthesis of unsaturated fatty acids 2
hvu01212 Fatty acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 548096 548013 11409833 818097 103867375 111211095 106414888 102619235 123151638 123152653 123169284 123411716 123410998 123410719 100833759
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