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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123407331   something about silencing protein 10-like 
 tae-r.2   123164612   something about silencing protein 10 
 bdi-r.1   100832433   something about silencing protein 10 
 osa-u.5   4326297   protein THALLO 
 zma-u.5   100381768   Sas10/U3 ribonucleoprotein (Utp) family protein 
 zma-u.5   103635805   uncharacterized LOC103635805 
 sbi-r.1   8055211   something about silencing protein 10 
 ath-u.5   EMB2777   Sas10/U3 ribonucleoprotein (Utp) family protein 
 gma-u.5   100812322   something about silencing protein 10 
 gma-u.5   100792030   something about silencing protein 10 
 sly-u.5   101245920   protein THALLO-like 
 sly-u.5   101245621   protein THALLO 
 bra-r.6   103858087   something about silencing protein 10 
 vvi-u.5   100264445   protein THALLO 
 ppo-u.5   18104578   protein THALLO 
 mtr-u.5   11444542   something about silencing protein 10 
 ghi-r.1   121215971   something about silencing protein 10 
 ghi-r.1   107945130   something about silencing protein 10 
 bna-r.1   111197784   something about silencing protein 10 
 bna-r.1   106388334   something about silencing protein 10 
 sot-r.1   102600085   something about silencing protein 10-like 
 sot-r.1   102597593   something about silencing protein 10-like 
 cit-r.1   102614055   protein THALLO 
 nta-r.1   107779177   protein THALLO-like 
 nta-r.1   107811333   protein THALLO 

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Top 50 coexpressed genes to 123407331 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123407331 (hvu-r.1 coexpression data)

CoexMap"123407331"


hvuLOC123407331 | Entrez gene ID : 123407331    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 1 2 1 1 2 2 1 1 1 1 2 2 2 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (40 genes)  IEA  
GO CC
GO:0032040 [list] [network] small-subunit processome  (43 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (205 genes)  IEA  
GO MF
Protein XP_044956380.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  mito 1,  plas 1,  cysk 1,  cysk_plas 1,  mito_plas 1  (predict for XP_044956380.1)
Subcellular
localization
TargetP
mito 6,  chlo 3  (predict for XP_044956380.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123407331
tae-r.2
for
123164612
bdi-r.1
for
100832433
osa-u.5
for
4326297
zma-u.5
for
100381768
zma-u.5
for
103635805
sbi-r.1
for
8055211
ath-u.5
for
EMB2777
gma-u.5
for
100812322
gma-u.5
for
100792030
sly-u.5
for
101245920
sly-u.5
for
101245621
bra-r.6
for
103858087
vvi-u.5
for
100264445
ppo-u.5
for
18104578
mtr-u.5
for
11444542
ghi-r.1
for
121215971
ghi-r.1
for
107945130
bna-r.1
for
111197784
bna-r.1
for
106388334
sot-r.1
for
102600085
sot-r.1
for
102597593
cit-r.1
for
102614055
nta-r.1
for
107779177
nta-r.1
for
107811333


Ortholog ID: 5975
Species hvu tae bdi osa zma zma sbi ath gma gma sly sly bra vvi ppo mtr ghi ghi bna bna sot sot cit nta nta
Symbol LOC123407331 LOC123148336 LOC100832433 LOC4326297 LOC100381768 LOC103635805 LOC8055211 EMB2777 LOC100812322 LOC100792030 LOC101245920 LOC101245621 LOC103858087 LOC100264445 LOC18104578 LOC11444542 LOC121215971 LOC107945130 LOC111197784 LOC106388334 LOC102600085 LOC102597593 LOC102614055 LOC107779177 LOC107811333
Function* something about silencing protein 10-like something about silencing protein 10 something about silencing protein 10 protein THALLO Sas10/U3 ribonucleoprotein (Utp) family protein uncharacterized LOC103635805 something about silencing protein 10 Sas10/U3 ribonucleoprotein (Utp) family protein something about silencing protein 10 something about silencing protein 10 protein THALLO-like protein THALLO something about silencing protein 10 protein THALLO protein THALLO something about silencing protein 10 something about silencing protein 10 something about silencing protein 10 something about silencing protein 10 something about silencing protein 10 something about silencing protein 10-like something about silencing protein 10-like protein THALLO protein THALLO-like protein THALLO
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03018 RNA degradation 2
cit03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123407331 123148336 100832433 4326297 100381768 103635805 8055211 818967 100812322 100792030 101245920 101245621 103858087 100264445 18104578 11444542 121215971 107945130 111197784 106388334 102600085 102597593 102614055 107779177 107811333
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