ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-r.5	11440468	sulfofructose kinase
mtr-u.5	11440468	sulfofructose kinase
mtr-m.5	11440468	sulfofructose kinase
mtr-u.5	25484182	ribokinase
mtr-u.5	25484181	ribokinase
mtr-u.5	11426715	ribokinase
gma-u.5	100802550	ketohexokinase
gma-u.5	100799353	ribokinase
gma-u.5	100794767	putative ribokinase/pfkB superfamily
ppo-u.5	7459529	uncharacterized LOC7459529
ath-u.5	AT4G28706	pfkB-like carbohydrate kinase family protein
ath-u.5	AT5G43910	pfkB-like carbohydrate kinase family protein
bra-r.6	103827943	5-dehydro-2-deoxygluconokinase
bra-r.6	103854186	ketohexokinase
vvi-u.5	100241187	uncharacterized LOC100241187
ghi-r.1	121231854	ribokinase
ghi-r.1	107925713	ribokinase
ghi-r.1	107916556	ribokinase
bna-r.1	106402061	ketohexokinase
bna-r.1	106407277	ribokinase
bna-r.1	125594375	5-dehydro-2-deoxygluconokinase-like
cit-r.1	102607453	uncharacterized LOC102607453
sly-u.5	101268137	uncharacterized LOC101268137
sly-u.5	101262237	uncharacterized LOC101262237
sot-r.1	102586184	ribokinase-like
sot-r.1	102578152	sulfofructose kinase-like
nta-r.1	107793340	uncharacterized LOC107793340
nta-r.1	107803772	uncharacterized LOC107803772
nta-r.1	107817318	uncharacterized LOC107817318
osa-u.5	112936048	uncharacterized LOC112936048
osa-u.5	4346357	uncharacterized LOC4346357
zma-u.5	100273018	uncharacterized LOC100273018
tae-r.2	123150865	sulfofructose kinase
tae-r.2	123044962	ketohexokinase
tae-r.2	123120271	ketohexokinase
hvu-r.1	123430498	ketohexokinase-like
hvu-r.1	123410544	sulfofructose kinase
sbi-r.1	8054097	ribokinase
sbi-r.1	8055185	sulfofructose kinase
bdi-r.1	100842249	ketohexokinase
bdi-r.1	100833701	sulfofructose kinase
cre-r.1	CHLRE_01g045640v5	uncharacterized protein

Top 50 coexpressed genes to 11440468 (mtr-r.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 11440468 (mtr-r.5 coexpression data)

CoexMap"11440468"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0016301 [list] [network] kinase activity

(1665 genes)

IEA

Protein

XP_003625449.2 [sequence] [blastp]
XP_039683707.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 3, chlo 2, cyto 2, nucl 1, mito 1, vacu 1, E.R. 1, E.R._vacu 1	(predict for XP_003625449.2)
plas 3, chlo 2, cyto 2, nucl 1, mito 1, vacu 1, E.R. 1, E.R._vacu 1	(predict for XP_039683707.1)

Subcellular
localization
TargetP

other 5, scret 3	(predict for XP_003625449.2)
other 5, scret 3	(predict for XP_039683707.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-r.5 for 11440468	mtr-u.5 for 11440468	mtr-m.5 for 11440468	mtr-u.5 for 25484182	mtr-u.5 for 25484181	mtr-u.5 for 11426715	gma-u.5 for 100802550	gma-u.5 for 100799353	gma-u.5 for 100794767	ppo-u.5 for 7459529	ath-u.5 for AT4G28706	ath-u.5 for AT5G43910	bra-r.6 for 103827943	bra-r.6 for 103854186	vvi-u.5 for 100241187	ghi-r.1 for 121231854	ghi-r.1 for 107925713	ghi-r.1 for 107916556	bna-r.1 for 106402061	bna-r.1 for 106407277	bna-r.1 for 125594375	cit-r.1 for 102607453	sly-u.5 for 101268137	sly-u.5 for 101262237	sot-r.1 for 102586184	sot-r.1 for 102578152	nta-r.1 for 107793340	nta-r.1 for 107803772	nta-r.1 for 107817318	osa-u.5 for 112936048	osa-u.5 for 4346357	zma-u.5 for 100273018	tae-r.2 for 123150865	tae-r.2 for 123044962	tae-r.2 for 123120271	hvu-r.1 for 123430498	hvu-r.1 for 123410544	sbi-r.1 for 8054097	sbi-r.1 for 8055185	bdi-r.1 for 100842249	bdi-r.1 for 100833701	cre-r.1 for CHLRE_01g045640v5

Ortholog

Ortholog ID: 3126

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

sulfofructose kinase

ribokinase

uncharacterized LOC7459529

pfkB-like carbohydrate kinase family protein

5-dehydro-2-deoxygluconokinase

ketohexokinase

uncharacterized LOC100241187

ribokinase

ketohexokinase

ribokinase

5-dehydro-2-deoxygluconokinase-like

uncharacterized LOC102607453

uncharacterized LOC101268137

uncharacterized LOC101262237

ribokinase-like

ribokinase

uncharacterized LOC107793340

uncharacterized LOC107803772

uncharacterized LOC107817318

uncharacterized LOC112936048

uncharacterized LOC4346357

uncharacterized LOC100273018

sulfofructose kinase

ketohexokinase-like

sulfofructose kinase

ribokinase

sulfofructose kinase

ketohexokinase

sulfofructose kinase

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00970	Aminoacyl-tRNA biosynthesis	2
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03060	Protein export	2
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01240	Biosynthesis of cofactors	3
ath01250	Biosynthesis of nucleotide sugars	2
ath00240	Pyrimidine metabolism	2
ath01232	Nucleotide metabolism	2
ath03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00195	Photosynthesis	2
bra00480	Glutathione metabolism	2
bra01230	Biosynthesis of amino acids	2
bra00710	Carbon fixation by Calvin cycle	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi02010	ABC transporters	2
ghi00514	Other types of O-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00130	Ubiquinone and other terpenoid-quinone biosynthesis	4
bna01240	Biosynthesis of cofactors	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00970	Aminoacyl-tRNA biosynthesis	7
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	2
nta00770	Pantothenate and CoA biosynthesis	2
nta01240	Biosynthesis of cofactors	2
nta00260	Glycine, serine and threonine metabolism	2
nta00470	D-Amino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00770	Pantothenate and CoA biosynthesis	2
nta01240	Biosynthesis of cofactors	2
nta00260	Glycine, serine and threonine metabolism	2
nta00470	D-Amino acid metabolism	2
nta00531	Glycosaminoglycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00710	Carbon fixation by Calvin cycle	6
zma01200	Carbon metabolism	6
zma01230	Biosynthesis of amino acids	5
zma01240	Biosynthesis of cofactors	4
zma00010	Glycolysis / Gluconeogenesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00920	Sulfur metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00920	Sulfur metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00920	Sulfur metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	6
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00730	Thiamine metabolism	2
bdi01240	Biosynthesis of cofactors	2
bdi04141	Protein processing in endoplasmic reticulum	2
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00970	Aminoacyl-tRNA biosynthesis	5

Expression

Expression pattern

Entrez Gene ID^*

11440468

25484182

25484181

100799353

100792838

100784774

7459529

828990

834413

103827943

103854186

100241187

107925713

107916556

107961190

106402061

106407277

125594375

102607453

101268137

101262237

102586184

102580411

107793340

107803772

107817318

112936048

4346357

100273018

123150865

123161147

123166751

123430498

123410544

8054097

8055185

100842249

100833701

5715667

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Species	mtr	gma	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	6	3	1	2	2	1	3	3	1	2	2	3	2	1	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11440468 (mtr-r.5 coexpression data)

Top 50 enrichment test to 11440468 (mtr-r.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**