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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-r.5   25479571   pentatricopeptide repeat-containing protein At5g06540 
 mtr-u.5   25479571   pentatricopeptide repeat-containing protein At5g06540 
 gma-u.5   100780299   pentatricopeptide repeat-containing protein At5g66520 
 vvi-u.5   100254394   pentatricopeptide repeat-containing protein ELI1, chloroplastic 
 cit-r.1   107177506   pentatricopeptide repeat-containing protein At5g66520-like 
 sly-u.5   101263467   pentatricopeptide repeat-containing protein At5g66520-like 
 sot-r.1   107061905   pentatricopeptide repeat-containing protein At5g66520-like 
 nta-r.1   107764279   pentatricopeptide repeat-containing protein At5g66520-like 
 nta-r.1   107828921   pentatricopeptide repeat-containing protein At5g66520-like 

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Top 50 coexpressed genes to 25479571 (mtr-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25479571 (mtr-r.5 coexpression data)

CoexMap"25479571"


mtrLOC25479571 | Entrez gene ID : 25479571      
Species mtr gma vvi cit sly sot nta sbi osa bra tae ath bna hvu ppo ghi zma cre bdi
Paralog 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_013443472.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_013443472.1)
Subcellular
localization
TargetP
other 4  (predict for XP_013443472.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-r.5
for
25479571
mtr-u.5
for
25479571
gma-u.5
for
100780299
vvi-u.5
for
100254394
cit-r.1
for
107177506
sly-u.5
for
101263467
sot-r.1
for
107061905
nta-r.1
for
107764279
nta-r.1
for
107828921


Ortholog ID: 16461
Species mtr gma vvi cit sly sot nta nta
Symbol LOC25479571 LOC100780299 LOC100254394 LOC107177506 LOC101263467 LOC107061905 LOC107764279 LOC107828921
Function* pentatricopeptide repeat-containing protein At5g06540 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein ELI1, chloroplastic pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25479571 100780299 100254394 107177506 101263467 107061905 107764279 107828921
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