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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-r.5   25493837   pentatricopeptide repeat-containing protein At5g56310 
 mtr-u.5   25493837   pentatricopeptide repeat-containing protein At5g56310 
 ppo-u.5   7497773   pentatricopeptide repeat-containing protein At5g08510 
 ghi-r.1   107951269   pentatricopeptide repeat-containing protein At5g66520 
 ghi-r.1   121211456   pentatricopeptide repeat-containing protein At1g74630 
 cit-r.1   102610280   pentatricopeptide repeat-containing protein At5g66520-like 
 cit-r.1   107174894   putative pentatricopeptide repeat-containing protein At3g15930 
 sot-r.1   102594310   pentatricopeptide repeat-containing protein At5g66520-like 
 nta-r.1   107818970   pentatricopeptide repeat-containing protein At5g66520-like 
 zma-u.5   103632731   pentatricopeptide repeat-containing protein At5g56310 

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Top 50 coexpressed genes to 25493837 (mtr-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25493837 (mtr-r.5 coexpression data)

CoexMap"25493837"


mtrLOC25493837 | Entrez gene ID : 25493837      
Species mtr ppo ghi cit sot nta zma sbi osa gma sly bra tae ath bna hvu vvi cre bdi
Paralog 2 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_013457922.1 [sequence] [blastp]
XP_024637155.1 [sequence] [blastp]
XP_039689422.1 [sequence] [blastp]
XP_039689423.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 5,  chlo_mito 5  (predict for XP_013457922.1)
chlo 5,  mito 5,  chlo_mito 5  (predict for XP_024637155.1)
chlo 5,  mito 5,  chlo_mito 5  (predict for XP_039689422.1)
chlo 5,  mito 5,  chlo_mito 5  (predict for XP_039689423.1)
Subcellular
localization
TargetP
other 6,  mito 5  (predict for XP_013457922.1)
other 6,  mito 5  (predict for XP_024637155.1)
other 6,  mito 5  (predict for XP_039689422.1)
other 6,  mito 5  (predict for XP_039689423.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-r.5
for
25493837
mtr-u.5
for
25493837
ppo-u.5
for
7497773
ghi-r.1
for
107951269
ghi-r.1
for
121211456
cit-r.1
for
102610280
cit-r.1
for
107174894
sot-r.1
for
102594310
nta-r.1
for
107818970
zma-u.5
for
103632731


Ortholog ID: 12510
Species mtr ppo ghi ghi cit cit sot nta zma
Symbol LOC25493837 LOC7497773 LOC107951269 LOC121211456 LOC102610280 LOC107174894 LOC102594310 LOC107818970 LOC103632731
Function* pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g08510 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At1g74630 pentatricopeptide repeat-containing protein At5g66520-like putative pentatricopeptide repeat-containing protein At3g15930 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g56310
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25493837 7497773 107951269 121211456 102610280 107174894 102594310 107818970 103632731
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