ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-r.5	25502271	uncharacterized LOC25502271
mtr-u.5	25502271	uncharacterized LOC25502271
gma-u.5	100805011	uncharacterized LOC100805011
ppo-u.5	7486841	uncharacterized LOC7486841
ath-u.5	AT4G01790	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
bra-r.6	103858802	ribonuclease P protein subunit p38
vvi-u.5	100255449	uncharacterized LOC100255449
ghi-r.1	107912243	uncharacterized LOC107912243
ghi-r.1	107923626	uncharacterized LOC107923626
cit-r.1	102629921	uncharacterized LOC102629921
sly-u.5	101250337	uncharacterized LOC101250337
sot-r.1	102585265	uncharacterized LOC102585265
osa-u.5	4344032	uncharacterized LOC4344032
zma-u.5	100285816	uncharacterized LOC100285816
zma-u.5	103633474	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
tae-r.2	123187818	uncharacterized LOC123187818
hvu-r.1	123425126	uncharacterized LOC123425126
hvu-r.1	123453176	uncharacterized LOC123453176
sbi-r.1	110432555	uncharacterized LOC110432555
bdi-r.1	100824571	uncharacterized LOC100824571

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_013447326.3 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, cyto_nucl 4, cyto 1, plas 1, golg_plas 1

(predict for XP_013447326.3)

Subcellular
localization
TargetP

chlo 6, other 4

(predict for XP_013447326.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-r.5 for 25502271	mtr-u.5 for 25502271	gma-u.5 for 100805011	ppo-u.5 for 7486841	ath-u.5 for AT4G01790	bra-r.6 for 103858802	vvi-u.5 for 100255449	ghi-r.1 for 107912243	ghi-r.1 for 107923626	cit-r.1 for 102629921	sly-u.5 for 101250337	sot-r.1 for 102585265	osa-u.5 for 4344032	zma-u.5 for 100285816	zma-u.5 for 103633474	tae-r.2 for 123187818	hvu-r.1 for 123425126	hvu-r.1 for 123453176	sbi-r.1 for 110432555	bdi-r.1 for 100824571

Ortholog

Ortholog ID: 10204

Species

mtr

gma

ppo

ath

bra

vvi

ghi

cit

sly

sot

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC25502271

uncharacterized LOC100805011

uncharacterized LOC7486841

Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

ribonuclease P protein subunit p38

uncharacterized LOC100255449

uncharacterized LOC107912243

uncharacterized LOC107923626

uncharacterized LOC102629921

uncharacterized LOC101250337

uncharacterized LOC102585265

uncharacterized LOC4344032

uncharacterized LOC100285816

Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

uncharacterized LOC123187818

uncharacterized LOC123425126

uncharacterized LOC123453176

uncharacterized LOC110432555

uncharacterized LOC100824571

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	11
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	5
ghi00940	Phenylpropanoid biosynthesis	2
ghi00941	Flavonoid biosynthesis	2
ghi00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4
ghi00051	Fructose and mannose metabolism	2
ghi00500	Starch and sucrose metabolism	2
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	6
sly03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03030	DNA replication	10
tae03410	Base excision repair	5
tae03420	Nucleotide excision repair	5
tae03430	Mismatch repair	5
tae03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	4
sbi03013	Nucleocytoplasmic transport	2

Expression

Expression pattern

Entrez Gene ID^*

25502271

100805011

7486841

827957

103858802

100255449

107912243

107923626

102629921

101250337

102585265

4344032

100285816

103633474

123187818

123425126

123453176

110432555

100824571

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 25502271 (mtr-r.5 coexpression data)

Top 50 enrichment test to 25502271 (mtr-r.5 coexpression data)


Species	mtr	gma	ppo	ath	bra	vvi	ghi	cit	sly	sot	osa	zma	tae	hvu	sbi	bdi	cre	bna	nta
Paralog	2	1	1	1	1	1	2	1	1	1	1	2	1	2	1	1	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 25502271 (mtr-r.5 coexpression data)

Top 50 enrichment test to 25502271 (mtr-r.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**