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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11405487   putative pentatricopeptide repeat-containing protein At3g05240 
 mtr-r.5   11405487   putative pentatricopeptide repeat-containing protein At3g05240 
 mtr-m.5   11405487   putative pentatricopeptide repeat-containing protein At3g05240 
 vvi-u.5   100853908   pentatricopeptide repeat-containing protein At3g12770 
 vvi-u.5   100854913   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 vvi-u.5   100263173   putative pentatricopeptide repeat-containing protein At3g05240 
 osa-u.5   4346006   putative pentatricopeptide repeat-containing protein At3g05240 
 bdi-r.1   104583732   putative pentatricopeptide repeat-containing protein At3g05240 

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Top 50 coexpressed genes to 11405487 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11405487 (mtr-u.5 coexpression data)

CoexMap"11405487"


mtrLOC11405487 | Entrez gene ID : 11405487      
Species mtr vvi osa bdi cre bra ath ppo hvu nta bna tae gma zma cit sly ghi sot sbi
Paralog 3 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5207 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_024639738.1 [sequence] [blastp]
XP_024639739.1 [sequence] [blastp]
XP_024639740.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 3,  extr 1,  cyto_mito 1,  mito_plas 1  (predict for XP_024639738.1)
chlo 5,  mito 3,  extr 1,  cyto_mito 1,  mito_plas 1  (predict for XP_024639739.1)
chlo 5,  mito 3,  extr 1,  cyto_mito 1,  mito_plas 1  (predict for XP_024639740.1)
Subcellular
localization
TargetP
scret 5,  other 4  (predict for XP_024639738.1)
scret 5,  other 4  (predict for XP_024639739.1)
scret 5,  other 4  (predict for XP_024639740.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11405487
mtr-r.5
for
11405487
mtr-m.5
for
11405487
vvi-u.5
for
100853908
vvi-u.5
for
100854913
vvi-u.5
for
100263173
osa-u.5
for
4346006
bdi-r.1
for
104583732


Ortholog ID: 14016
Species mtr vvi vvi vvi osa bdi
Symbol LOC11405487 LOC100853908 LOC100854913 LOC100263173 LOC4346006 LOC104583732
Function* putative pentatricopeptide repeat-containing protein At3g05240 pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At1g08070, chloroplastic putative pentatricopeptide repeat-containing protein At3g05240 putative pentatricopeptide repeat-containing protein At3g05240 putative pentatricopeptide repeat-containing protein At3g05240
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11405487 100853908 100854913 100263173 4346006 104583732
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