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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11407460   protein PLASTID REDOX INSENSITIVE 2, chloroplastic 
 mtr-r.5   11407460   protein PLASTID REDOX INSENSITIVE 2, chloroplastic 
 gma-u.5   100778043   protein PLASTID REDOX INSENSITIVE 2, chloroplastic 
 gma-u.5   102661727   protein PLASTID REDOX INSENSITIVE 2, chloroplastic 
 ghi-r.1   107903702   protein PLASTID REDOX INSENSITIVE 2, chloroplastic 
 ghi-r.1   107959973   protein PLASTID REDOX INSENSITIVE 2, chloroplastic 
 sly-u.5   104647252   protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like 
 sot-r.1   102606000   uncharacterized LOC102606000 
 nta-r.1   107780943   protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like 
 nta-r.1   107813503   protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like 

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Top 50 coexpressed genes to 11407460 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11407460 (mtr-u.5 coexpression data)

CoexMap"11407460"


mtrLOC11407460 | Entrez gene ID : 11407460      
Species mtr gma ghi sly sot nta sbi osa cit bra tae ath bna hvu ppo vvi zma cre bdi
Paralog 2 2 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010468 [list] [network] regulation of gene expression  (1961 genes)  IEA  
GO CC
GO MF
Protein XP_003628661.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 2  (predict for XP_003628661.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003628661.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11407460
mtr-r.5
for
11407460
gma-u.5
for
100778043
gma-u.5
for
102661727
ghi-r.1
for
107903702
ghi-r.1
for
107959973
sly-u.5
for
104647252
sot-r.1
for
102606000
nta-r.1
for
107780943
nta-r.1
for
107813503


Ortholog ID: 15620
Species mtr gma gma ghi ghi sly sot nta nta
Symbol LOC11407460 LOC100778043 LOC102661727 LOC107903702 LOC107959973 LOC104647252 LOC102606000 LOC107780943 LOC107813503
Function* protein PLASTID REDOX INSENSITIVE 2, chloroplastic protein PLASTID REDOX INSENSITIVE 2, chloroplastic protein PLASTID REDOX INSENSITIVE 2, chloroplastic protein PLASTID REDOX INSENSITIVE 2, chloroplastic protein PLASTID REDOX INSENSITIVE 2, chloroplastic protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like uncharacterized LOC102606000 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 5
gma00340 Histidine metabolism 2
gma00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma03010 Ribosome 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
gma00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00280 Valine, leucine and isoleucine degradation 3
sot00410 beta-Alanine metabolism 3
sot00640 Propanoate metabolism 3
sot01200 Carbon metabolism 3
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00062 Fatty acid elongation 2
nta01212 Fatty acid metabolism 2
nta04142 Lysosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11407460 100778043 102661727 107903702 107959973 104647252 102606000 107780943 107813503
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