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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11411690   ATP-dependent RNA helicase DEAH13 
 mtr-r.5   11411690   ATP-dependent RNA helicase DEAH13 
 mtr-m.5   11411690   ATP-dependent RNA helicase DEAH13 
 mtr-u.5   11424352   ATP-dependent RNA helicase DEAH13 
 gma-u.5   100788201   ATP-dependent RNA helicase DEAH13 
 gma-u.5   100782767   ATP-dependent RNA helicase DEAH13 
 ppo-u.5   7487803   ATP-dependent RNA helicase DEAH13 
 ath-u.5   FAS4   RNA helicase family protein 
 vvi-u.5   100262427   ATP-dependent RNA helicase DEAH13 
 sly-u.5   101245407   ATP-dependent RNA helicase DEAH13 
 osa-u.5   4330659   ATP-dependent RNA helicase DEAH13 
 zma-u.5   103627696   ATP-dependent RNA helicase DEAH13 

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Top 50 coexpressed genes to 11411690 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11411690 (mtr-u.5 coexpression data)

CoexMap"11411690"


mtrLOC11411690 | Entrez gene ID : 11411690      
Species mtr gma ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 4 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (32 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (210 genes)  IEA  
GO:0005622 [list] [network] intracellular anatomical structure  (7440 genes)  IEA  
GO MF
GO:0004386 [list] [network] helicase activity  (233 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
Protein XP_024637442.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  mito 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_024637442.1)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for XP_024637442.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11411690

.
mtr-r.5
for
11411690

.
mtr-m.5
for
11411690

.
mtr-u.5
for
11424352

.
gma-u.5
for
100788201

.
gma-u.5
for
100782767

.
ppo-u.5
for
7487803

.
ath-u.5
for
FAS4

.
vvi-u.5
for
100262427

.
sly-u.5
for
101245407

.
osa-u.5
for
4330659

.
zma-u.5
for
103627696

.


Ortholog ID: 7829
Species ath gma gma sly osa zma bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sot cit bdi nta nta
Symbol FAS4 LOC100782767 LOC100788201 LOC101245407 LOC4330659 LOC103627696 LOC103854246 LOC100262427 LOC7487803 LOC11424352 LOC11411690 LOC123128330 LOC123136894 LOC123401906 LOC123425789 LOC107954262 LOC107953052 LOC106375492 LOC106401920 CHLRE_07g352251v5 LOC102604659 LOC102620556 LOC100831565 LOC107829563 LOC107770815
Function* RNA helicase family protein ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13-like ATP-dependent RNA helicase DEAH13-like ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13-like ATP-dependent RNA helicase DEAH13 uncharacterized protein probable ATP-dependent RNA helicase DHX37 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
ath03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 3
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi03082 ATP-dependent chromatin remodeling 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840232 100782767 100788201 101245407 4330659 103627696 103854246 100262427 7487803 11424352 11411690 123128330 123136894 123401906 123425789 107954262 107953052 106375492 106401920 5718080 102604659 102620556 100831565 107829563 107770815
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