ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	11415556	nucleolar protein 58
mtr-r.5	11415556	nucleolar protein 58
mtr-m.5	11415556	nucleolar protein 58
gma-u.5	100306577	uncharacterized LOC100306577
gma-u.5	100782047	uncharacterized LOC100782047
ppo-u.5	7473123	uncharacterized LOC7473123
ath-u.5	AT4G37090	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase
bra-r.6	103863725	neurofilament medium polypeptide
bra-r.6	103835012	uncharacterized protein DDB_G0286299
vvi-u.5	100240828	uncharacterized LOC100240828
ghi-r.1	107944477	uncharacterized LOC107944477
ghi-r.1	107909347	uncharacterized LOC107909347
bna-r.1	111202029	ATP-dependent RNA helicase DBP4
bna-r.1	106389826	uncharacterized LOC106389826
bna-r.1	106369676	neurofilament medium polypeptide-like
cit-r.1	102617901	uncharacterized LOC102617901
sly-u.5	101259806	uncharacterized LOC101259806
sot-r.1	102596083	uncharacterized LOC102596083
nta-r.1	107820254	uncharacterized LOC107820254
nta-r.1	107819215	uncharacterized LOC107819215
osa-u.5	4328541	protein pxr1
zma-u.5	100276302	uncharacterized LOC100276302
zma-u.5	100278022	uncharacterized LOC100278022
tae-r.2	123136868	uncharacterized LOC123136868
tae-r.2	123127282	uncharacterized LOC123127282
tae-r.2	123144321	uncharacterized LOC123144321
hvu-r.1	123402096	uncharacterized LOC123402096
sbi-r.1	8079423	uncharacterized LOC8079423
bdi-r.1	100834010	uncharacterized LOC100834010

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003611849.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto_nucl 5

(predict for XP_003611849.1)

Subcellular
localization
TargetP

other 8

(predict for XP_003611849.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11415556	mtr-r.5 for 11415556	mtr-m.5 for 11415556	gma-u.5 for 100306577	gma-u.5 for 100782047	ppo-u.5 for 7473123	ath-u.5 for AT4G37090	bra-r.6 for 103863725	bra-r.6 for 103835012	vvi-u.5 for 100240828	ghi-r.1 for 107944477	ghi-r.1 for 107909347	bna-r.1 for 111202029	bna-r.1 for 106389826	bna-r.1 for 106369676	cit-r.1 for 102617901	sly-u.5 for 101259806	sot-r.1 for 102596083	nta-r.1 for 107820254	nta-r.1 for 107819215	osa-u.5 for 4328541	zma-u.5 for 100276302	zma-u.5 for 100278022	tae-r.2 for 123136868	tae-r.2 for 123127282	tae-r.2 for 123144321	hvu-r.1 for 123402096	sbi-r.1 for 8079423	bdi-r.1 for 100834010

Ortholog

Ortholog ID: 8114

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

nucleolar protein 58

uncharacterized LOC100306577

uncharacterized LOC100782047

uncharacterized LOC7473123

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase

neurofilament medium polypeptide

uncharacterized protein DDB_G0286299

uncharacterized LOC100240828

uncharacterized LOC107944477

uncharacterized LOC107909347

uncharacterized LOC106389826

neurofilament medium polypeptide-like

uncharacterized LOC102617901

uncharacterized LOC101259806

uncharacterized LOC102596083

uncharacterized LOC107820254

uncharacterized LOC107819215

protein pxr1

uncharacterized LOC100276302

uncharacterized LOC100278022

uncharacterized LOC123136868

uncharacterized LOC123127282

uncharacterized LOC123144321

uncharacterized LOC123402096

uncharacterized LOC8079423

uncharacterized LOC100834010

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03020	RNA polymerase	3
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	6
gma03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	10
ghi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	8
ghi00970	Aminoacyl-tRNA biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4
bna03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	14
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	3
sly03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	4
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	4
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04122	Sulfur relay system	2
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	5
sbi00340	Histidine metabolism	2
sbi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	3
bdi03008	Ribosome biogenesis in eukaryotes	3

Expression

Expression pattern

Entrez Gene ID^*

11415556

100306577

100782047

7473123

829863

103863725

103835012

100240828

107944477

107909347

106389826

106369676

102617901

101259806

102596083

107820254

107819215

4328541

100276302

100278022

123136868

123127282

123144321

123402096

8079423

100834010

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 11415556 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11415556 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	1	1	2	1	2	3	1	1	1	2	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11415556 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11415556 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**