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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11420142   E3 ubiquitin-protein ligase At4g11680 
 mtr-r.5   11420142   E3 ubiquitin-protein ligase At4g11680 
 mtr-m.5   11420142   E3 ubiquitin-protein ligase At4g11680 
 mtr-u.5   11422685   E3 ubiquitin-protein ligase At4g11680 
 gma-u.5   100806994   E3 ubiquitin-protein ligase At4g11680 
 gma-u.5   100808066   E3 ubiquitin-protein ligase At4g11680 
 vvi-u.5   100253433   E3 ubiquitin-protein ligase At1g12760 
 cit-r.1   102620088   E3 ubiquitin-protein ligase At4g11680 
 sly-u.5   101253241   RING finger superfamily protein 
 sot-r.1   102582007   E3 ubiquitin-protein ligase At4g11680-like 
 nta-r.1   107769153   E3 ubiquitin-protein ligase At4g11680 
 nta-r.1   107815095   E3 ubiquitin-protein ligase At4g11680 

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Top 50 coexpressed genes to 11420142 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11420142 (mtr-u.5 coexpression data)

CoexMap"11420142"


mtrLOC11420142 | Entrez gene ID : 11420142      
Species mtr gma vvi cit sly sot nta sbi osa bra tae ath bna hvu ppo ghi zma cre bdi
Paralog 4 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (329 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (368 genes)  IEA  
GO CC
GO:0000325 [list] [network] plant-type vacuole  (47 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (196 genes)  IEA  
Protein XP_003624876.3 [sequence] [blastp]
XP_039684023.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  plas 4,  mito 1,  E.R. 1,  golg 1,  cyto_mito 1  (predict for XP_003624876.3)
plas 4,  chlo 2,  nucl_plas 2,  golg_plas 2,  E.R._plas 2  (predict for XP_039684023.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_003624876.3)
chlo 6,  mito 4  (predict for XP_039684023.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11420142
mtr-r.5
for
11420142
mtr-m.5
for
11420142
mtr-u.5
for
11422685
gma-u.5
for
100806994
gma-u.5
for
100808066
vvi-u.5
for
100253433
cit-r.1
for
102620088
sly-u.5
for
101253241
sot-r.1
for
102582007
nta-r.1
for
107769153
nta-r.1
for
107815095


Ortholog ID: 15560
Species mtr mtr gma gma vvi cit sly sot nta nta
Symbol LOC11420142 LOC11422685 LOC100806994 LOC100808066 LOC100253433 LOC102620088 LOC101253241 LOC102582007 LOC107769153 LOC107815095
Function* E3 ubiquitin-protein ligase At4g11680 E3 ubiquitin-protein ligase At4g11680 E3 ubiquitin-protein ligase At4g11680 E3 ubiquitin-protein ligase At4g11680 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At4g11680 RING finger superfamily protein E3 ubiquitin-protein ligase At4g11680-like E3 ubiquitin-protein ligase At4g11680 E3 ubiquitin-protein ligase At4g11680
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 5
mtr04075 Plant hormone signal transduction 4
mtr04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma00030 Pentose phosphate pathway 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04144 Endocytosis 2
gma04145 Phagosome 2
gma04148 Efferocytosis 2
gma00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00260 Glycine, serine and threonine metabolism 2
cit00310 Lysine degradation 2
cit04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 7
nta01200 Carbon metabolism 5
nta00010 Glycolysis / Gluconeogenesis 3
nta00020 Citrate cycle (TCA cycle) 3
nta00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 4
nta00010 Glycolysis / Gluconeogenesis 2
nta00051 Fructose and mannose metabolism 2
nta00052 Galactose metabolism 2
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11420142 11422685 100806994 100808066 100253433 102620088 101253241 102582007 107769153 107815095
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