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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11427129   putative pentatricopeptide repeat-containing protein At5g37570 
 mtr-r.5   11427129   putative pentatricopeptide repeat-containing protein At5g37570 
 mtr-u.5   11423578   putative pentatricopeptide repeat-containing protein At5g37570 
 gma-u.5   100785384   putative pentatricopeptide repeat-containing protein At5g37570 
 ghi-r.1   107931569   putative pentatricopeptide repeat-containing protein At5g37570 
 ghi-r.1   107963158   putative pentatricopeptide repeat-containing protein At5g37570 
 cit-r.1   102631404   pentatricopeptide repeat-containing protein At5g44230-like 

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Top 50 coexpressed genes to 11427129 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11427129 (mtr-u.5 coexpression data)

CoexMap"11427129"


mtrLOC11427129 | Entrez gene ID : 11427129      
Species mtr gma ghi cit sbi osa sot sly bra tae ath bna hvu ppo vvi zma cre nta bdi
Paralog 3 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_003610566.2 [sequence] [blastp]
XP_024638389.1 [sequence] [blastp]
XP_039689887.1 [sequence] [blastp]
XP_039689888.1 [sequence] [blastp]
XP_039689889.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  chlo 2,  mito 1,  mito_plas 1,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_003610566.2)
extr 4,  chlo 2,  mito 1,  mito_plas 1,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_024638389.1)
extr 4,  chlo 2,  mito 1,  mito_plas 1,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_039689887.1)
extr 4,  chlo 2,  mito 1,  mito_plas 1,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_039689888.1)
extr 4,  chlo 2,  mito 1,  mito_plas 1,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_039689889.1)
Subcellular
localization
TargetP
scret 3  (predict for XP_003610566.2)
scret 3  (predict for XP_024638389.1)
scret 3  (predict for XP_039689887.1)
scret 3  (predict for XP_039689888.1)
scret 3  (predict for XP_039689889.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11427129
mtr-r.5
for
11427129
mtr-u.5
for
11423578
gma-u.5
for
100785384
ghi-r.1
for
107931569
ghi-r.1
for
107963158
cit-r.1
for
102631404


Ortholog ID: 16459
Species mtr mtr gma ghi ghi cit
Symbol LOC11427129 LOC11423578 LOC100785384 LOC107931569 LOC107963158 LOC102631404
Function* putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570 pentatricopeptide repeat-containing protein At5g44230-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 6
mtr03015 mRNA surveillance pathway 3
mtr03020 RNA polymerase 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11427129 11423578 100785384 107931569 107963158 102631404
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