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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5  11429601  pentatricopeptide repeat-containing protein At4g39620, chloroplastic 
 mtr-r.5  11429601  pentatricopeptide repeat-containing protein At4g39620, chloroplastic 
 mtr-m.5  11429601  pentatricopeptide repeat-containing protein At4g39620, chloroplastic 
 gma-u.5  100778561  pentatricopeptide repeat-containing protein At1g62670, mitochondrial 
 ppo-u.5  7495719  pentatricopeptide repeat-containing protein At2g30780 
 vvi-u.5  100262795  pentatricopeptide repeat-containing protein At5g02860 
 osa-u.5  4331692  pentatricopeptide repeat-containing protein At2g30780 
 zma-u.5  103631742  pentatricopeptide repeat-containing protein, mitochondrial-like 

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Top 50 coexpressed genes to 11429601 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11429601 (mtr-u.5 coexpression data)

CoexMap"11429601"


mtrLOC11429601 | Entrez gene ID : 11429601
Species mtr gma ppo vvi osa zma sot hvu ath tae cit sbi sly ghi cre bna nta bdi bra
Paralog 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (294 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_003588542.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  chlo_mito 5,  mito 4,  cyto_mito 2  (predict for XP_003588542.1)
Subcellular
localization
TargetP
chlo 6,  mito 6  (predict for XP_003588542.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

mtr-u.5
for
11429601

.

mtr-r.5
for
11429601

.

mtr-m.5
for
11429601

.

gma-u.5
for
100778561

.

ppo-u.5
for
7495719

.

vvi-u.5
for
100262795

.

osa-u.5
for
4331692

.

zma-u.5
for
103631742

.


Ortholog ID: 13558
Species gma osa zma vvi ppo mtr hvu ghi sbi cit bdi
Symbol LOC100778561 LOC4331692 LOC103631742 LOC100262795 LOC7495719 LOC11429601 LOC123447000 LOC107887074 LOC8085454 LOC102616387 LOC100841073
Function* pentatricopeptide repeat-containing protein At1g62670, mitochondrial pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein, mitochondrial-like pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At4g39620, chloroplastic pentatricopeptide repeat-containing protein At2g30780-like pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like pentatricopeptide repeat-containing protein At2g30780
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100778561 4331692 103631742 100262795 7495719 11429601 123447000 107887074 8085454 102616387 100841073
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