ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	25485826	syncoilin
mtr-r.5	25485826	syncoilin
gma-u.5	100794044	transcription factor SRG-like protein
ppo-u.5	7491634	uncharacterized LOC7491634
ath-u.5	AT3G52900	RAB6-interacting golgin (DUF662)
bra-r.6	103850269	uncharacterized LOC103850269
bra-r.6	103841220	uncharacterized LOC103841220
bna-r.1	106367806	uncharacterized LOC106367806
bna-r.1	106367928	uncharacterized LOC106367928
bna-r.1	BNAC06G14220D	uncharacterized BNAC06G14220D
sly-u.5	101249597	uncharacterized LOC101249597
sot-r.1	102595948	uncharacterized LOC102595948
nta-r.1	107780825	uncharacterized LOC107780825
nta-r.1	107794196	uncharacterized LOC107794196

functional annotation

Function

syncoilin

KEGG

GO BP

GO CC

GO MF

Protein

XP_013469397.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, chlo 2, mito 1, cyto 1, plas 1, cyto_mito 1, cyto_plas 1

(predict for XP_013469397.2)

Subcellular
localization
TargetP

other 4

(predict for XP_013469397.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25485826	mtr-r.5 for 25485826	gma-u.5 for 100794044	ppo-u.5 for 7491634	ath-u.5 for AT3G52900	bra-r.6 for 103850269	bra-r.6 for 103841220	bna-r.1 for 106367806	bna-r.1 for 106367928	bna-r.1 for BNAC06G14220D	sly-u.5 for 101249597	sot-r.1 for 102595948	nta-r.1 for 107780825	nta-r.1 for 107794196

Please wait a moment.

Ortholog ID: 12907

Species

mtr

gma

ppo

ath

bra

bna

sly

sot

nta

Symbol

Function^*

syncoilin

transcription factor SRG-like protein

uncharacterized LOC7491634

RAB6-interacting golgin (DUF662)

uncharacterized LOC103850269

uncharacterized LOC103841220

uncharacterized LOC106367806

uncharacterized LOC106367928

uncharacterized LOC111203617

uncharacterized LOC101249597

uncharacterized LOC102595948

uncharacterized LOC107780825

uncharacterized LOC107794196

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00051	Fructose and mannose metabolism	2
mtr00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00999	Biosynthesis of various plant secondary metabolites	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

25485826

100794044

7491634

824456

103850269

103841220

106367806

106367928

111203617

101249597

102595948

107780825

107794196

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 25485826 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25485826 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	bra	bna	sly	sot	nta	tae	bdi	cit	hvu	zma	sbi	osa	ghi	cre	vvi
Paralog	2	1	1	1	2	3	1	1	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 25485826 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25485826 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**