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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25492715   cytochrome c biogenesis protein CCS1, chloroplastic 
 mtr-r.5   25492715   cytochrome c biogenesis protein CCS1, chloroplastic 
 gma-u.5   100807003   cytochrome c biogenesis protein CCS1, chloroplastic 
 ppo-u.5   18102130   cytochrome c biogenesis protein CCS1, chloroplastic 
 ath-u.5   AT1G49380   cytochrome c biogenesis protein family 
 bra-r.6   103832947   cytochrome c biogenesis protein CCS1, chloroplastic 
 vvi-u.5   100265915   cytochrome c biogenesis protein CCS1, chloroplastic 
 ghi-r.1   107886974   cytochrome c biogenesis protein CCS1, chloroplastic 
 ghi-r.1   121214828   cytochrome c biogenesis protein CCS1, chloroplastic 
 bna-r.1   106423846   cytochrome c biogenesis protein CCS1, chloroplastic 
 bna-r.1   106439078   cytochrome c biogenesis protein CCS1, chloroplastic 
 cit-r.1   102620665   cytochrome c biogenesis protein CCS1, chloroplastic 
 sly-u.5   101244041   cytochrome c biogenesis protein CCS1, chloroplastic 
 sot-r.1   102592128   cytochrome c biogenesis protein CCS1, chloroplastic 
 nta-r.1   107811366   cytochrome c biogenesis protein CCS1, chloroplastic-like 
 nta-r.1   107801882   cytochrome c biogenesis protein CCS1, chloroplastic 
 osa-u.5   4334251   cytochrome c biogenesis protein CCS1, chloroplastic-like 
 zma-u.5   100275725   uncharacterized LOC100275725 
 tae-r.2   123113448   cytochrome c biogenesis protein CCS1, chloroplastic 
 tae-r.2   123105158   cytochrome c biogenesis protein CCS1, chloroplastic 
 tae-r.2   123122966   cytochrome c biogenesis protein CCS1, chloroplastic 
 hvu-r.1   123398492   cytochrome c biogenesis protein CCS1, chloroplastic 
 sbi-r.1   8085836   cytochrome c biogenesis protein CCS1, chloroplastic 
 bdi-r.1   100824637   cytochrome c biogenesis protein CCS1, chloroplastic 
 cre-r.1   CHLRE_13g575000v5   uncharacterized protein 

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Top 50 coexpressed genes to 25492715 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25492715 (mtr-u.5 coexpression data)

CoexMap"25492715"


mtrLOC25492715 | Entrez gene ID : 25492715      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 1 1 2 2 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_013456369.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  chlo 4,  mito 1,  E.R. 1,  pero 1  (predict for XP_013456369.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_013456369.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25492715
mtr-r.5
for
25492715
gma-u.5
for
100807003
ppo-u.5
for
18102130
ath-u.5
for
AT1G49380
bra-r.6
for
103832947
vvi-u.5
for
100265915
ghi-r.1
for
107886974
ghi-r.1
for
121214828
bna-r.1
for
106423846
bna-r.1
for
106439078
cit-r.1
for
102620665
sly-u.5
for
101244041
sot-r.1
for
102592128
nta-r.1
for
107811366
nta-r.1
for
107801882
osa-u.5
for
4334251
zma-u.5
for
100275725
tae-r.2
for
123113448
tae-r.2
for
123105158
tae-r.2
for
123122966
hvu-r.1
for
123398492
sbi-r.1
for
8085836
bdi-r.1
for
100824637
cre-r.1
for
CHLRE_13g575000v5


Ortholog ID: 10507
Species mtr gma ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC25492715 LOC100807003 LOC18102130 AT1G49380 LOC103832947 LOC100265915 LOC107886974 LOC121214828 LOC106423846 LOC106439078 LOC102620665 LOC101244041 LOC102592128 LOC107811366 LOC107801882 LOC4334251 LOC100275725 LOC123113448 LOC123105158 LOC123122966 LOC123398492 LOC8085836 LOC100824637 CHLRE_13g575000v5
Function* cytochrome c biogenesis protein CCS1, chloroplastic cytochrome c biogenesis protein CCS1, chloroplastic cytochrome c biogenesis protein CCS1, chloroplastic cytochrome c biogenesis protein family cytochrome c biogenesis protein CCS1, chloroplastic cytochrome c biogenesis protein CCS1, chloroplastic cytochrome c biogenesis protein CCS1, chloroplastic cytochrome c biogenesis protein CCS1, chloroplastic cytochrome c biogenesis protein CCS1, chloroplastic cytochrome c biogenesis protein CCS1, chloroplastic cytochrome c biogenesis protein CCS1, chloroplastic cytochrome c biogenesis protein CCS1, chloroplastic cytochrome c biogenesis protein CCS1, chloroplastic cytochrome c biogenesis protein CCS1, chloroplastic-like cytochrome c biogenesis protein CCS1, chloroplastic cytochrome c biogenesis protein CCS1, chloroplastic-like uncharacterized LOC100275725 cytochrome c biogenesis protein CCS1, chloroplastic cytochrome c biogenesis protein CCS1, chloroplastic cytochrome c biogenesis protein CCS1, chloroplastic cytochrome c biogenesis protein CCS1, chloroplastic cytochrome c biogenesis protein CCS1, chloroplastic cytochrome c biogenesis protein CCS1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi04146 Peroxisome 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna00100 Steroid biosynthesis 2
bna00561 Glycerolipid metabolism 2
bna00564 Glycerophospholipid metabolism 2
bna00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00906 Carotenoid biosynthesis 2
sly00970 Aminoacyl-tRNA biosynthesis 2
sly00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00710 Carbon fixation by Calvin cycle 3
sot01200 Carbon metabolism 3
sot01230 Biosynthesis of amino acids 3
sot00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25492715 100807003 18102130 841361 103832947 100265915 107886974 121214828 106423846 106439078 102620665 101244041 102592128 107811366 107801882 4334251 100275725 123113448 123105158 123122966 123398492 8085836 100824637 5717103
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