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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25496655   pentatricopeptide repeat-containing protein At3g22470, mitochondrial 
 mtr-r.5   25496655   pentatricopeptide repeat-containing protein At3g22470, mitochondrial 
 mtr-u.5   11436467   pentatricopeptide repeat-containing protein At1g62930, chloroplastic 
 osa-u.5   4335550   protein Rf1, mitochondrial 
 osa-u.5   9267680   protein Rf1, mitochondrial 
 zma-u.5   103648130   protein Rf1, mitochondrial-like 
 zma-u.5   103648111   protein Rf1, mitochondrial 
 zma-u.5   103635420   protein Rf1, mitochondrial 

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Top 50 coexpressed genes to 25496655 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25496655 (mtr-u.5 coexpression data)

CoexMap"25496655"


mtrLOC25496655 | Entrez gene ID : 25496655    
Species mtr osa zma tae cit ppo sly gma cre vvi bna nta ath hvu sot sbi ghi bdi bra
Paralog 3 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031930 [list] [network] mitochondria-nucleus signaling pathway  (14 genes)  IEA  
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (15 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (642 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_003619926.2 [sequence] [blastp]
XP_024641146.1 [sequence] [blastp]
XP_024641147.1 [sequence] [blastp]
XP_024641148.1 [sequence] [blastp]
XP_024641149.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  E.R. 1  (predict for XP_003619926.2)
chlo 6,  mito 1,  E.R. 1  (predict for XP_024641146.1)
chlo 6,  mito 1,  E.R. 1  (predict for XP_024641147.1)
chlo 6,  mito 1,  E.R. 1  (predict for XP_024641148.1)
chlo 6,  E.R. 2,  mito 1  (predict for XP_024641149.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_003619926.2)
mito 9  (predict for XP_024641146.1)
mito 9  (predict for XP_024641147.1)
mito 9  (predict for XP_024641148.1)
mito 9  (predict for XP_024641149.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25496655

.
mtr-r.5
for
25496655

.
mtr-u.5
for
11436467

.
osa-u.5
for
4335550

.
osa-u.5
for
9267680

.
zma-u.5
for
103648130

.
zma-u.5
for
103648111

.
zma-u.5
for
103635420

.


Ortholog ID: 453
Species osa zma zma mtr mtr hvu sbi cit bdi bdi
Symbol LOC4349026 LOC100502534 LOC103648099 LOC25496655 LOC11436467 LOC123400459 LOC8057874 LOC107178149 LOC100824374 LOC104583263
Function* protein Rf1, mitochondrial PPR-814a protein Rf1, mitochondrial pentatricopeptide repeat-containing protein At3g22470, mitochondrial pentatricopeptide repeat-containing protein At1g62930, chloroplastic protein Rf1, mitochondrial-like protein Rf1, mitochondrial protein Rf1, mitochondrial-like protein Rf1, mitochondrial protein Rf1, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4349026 100502534 103648099 25496655 11436467 123400459 8057874 107178149 100824374 104583263
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