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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25499532   pentatricopeptide repeat-containing protein At5g06540 
 mtr-r.5   25499532   pentatricopeptide repeat-containing protein At5g06540 
 ath-u.5   AT5G06540   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103846994   pentatricopeptide repeat-containing protein At5g06540 
 vvi-u.5   100261634   pentatricopeptide repeat-containing protein At5g06540 
 bna-r.1   106375465   pentatricopeptide repeat-containing protein At5g06540-like 
 bna-r.1   106419300   pentatricopeptide repeat-containing protein At5g06540-like 

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Top 50 coexpressed genes to 25499532 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25499532 (mtr-u.5 coexpression data)

CoexMap"25499532"


mtrLOC25499532 | Entrez gene ID : 25499532      
Species mtr ath bra vvi bna sbi osa gma sot sly cit tae hvu ppo ghi zma cre nta bdi
Paralog 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (919 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_024626855.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  chlo_mito 4,  mito 1,  plas 1,  vacu 1,  E.R. 1,  nucl_plas 1,  golg_plas 1,  E.R._vacu 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_024626855.2)
Subcellular
localization
TargetP
mito 7,  scret 6  (predict for XP_024626855.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25499532
mtr-r.5
for
25499532
ath-u.5
for
AT5G06540
bra-r.6
for
103846994
vvi-u.5
for
100261634
bna-r.1
for
106375465
bna-r.1
for
106419300


Ortholog ID: 14757
Species mtr ath bra vvi bna bna
Symbol LOC25499532 AT5G06540 LOC103846994 LOC100261634 LOC106375465 LOC106419300
Function* pentatricopeptide repeat-containing protein At5g06540 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g06540 pentatricopeptide repeat-containing protein At5g06540 pentatricopeptide repeat-containing protein At5g06540-like pentatricopeptide repeat-containing protein At5g06540-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25499532 830542 103846994 100261634 106375465 106419300
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