ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-m.8	4331122	60S ribosomal protein L23
osa-u.5	4331122	60S ribosomal protein L23
osa-r.6	4331122	60S ribosomal protein L23
osa-e.1	4331122	60S ribosomal protein L23
osa-u.5	4348846	large ribosomal subunit protein uL14
osa-u.5	4331562	large ribosomal subunit protein uL14
tae-r.2	123098957	60S ribosomal protein L23
tae-r.2	123093708	60S ribosomal protein L23
tae-r.2	123045041	60S ribosomal protein L23
hvu-r.1	123401590	60S ribosomal protein L23
hvu-r.1	123430526	60S ribosomal protein L23
hvu-r.1	123449842	60S ribosomal protein L23-like
bdi-r.1	100826448	60S ribosomal protein L23
bdi-r.1	100829924	60S ribosomal protein L23
bdi-r.1	100838831	60S ribosomal protein L23
zma-u.5	100281952	60S ribosomal protein L23
zma-u.5	100272919	60S ribosomal protein L23-like
zma-u.5	100303995	60S ribosomal protein L23
sbi-r.1	8085517	60S ribosomal protein L23
sbi-r.1	8084702	60S ribosomal protein L23
sbi-r.1	8059259	60S ribosomal protein L23
ath-u.5	AT2G33370	Ribosomal protein L14p/L23e family protein
ath-u.5	emb2171	Ribosomal protein L14p/L23e family protein
ath-u.5	AT1G04480	Ribosomal protein L14p/L23e family protein
gma-u.5	100794110	60S ribosomal protein L23
gma-u.5	100786299	60S ribosomal protein L23
gma-u.5	100306699	uncharacterized LOC100306699
sly-u.5	101263520	large ribosomal subunit protein uL14
sly-u.5	L23	60S ribosomal protein L23
sly-u.5	101245201	large ribosomal subunit protein uL14
bra-r.6	103859034	60S ribosomal protein L23
bra-r.6	103836571	60S ribosomal protein L23
bra-r.6	103848919	60S ribosomal protein L23
vvi-u.5	100242525	large ribosomal subunit protein uL14
ppo-u.5	7459987	60S ribosomal protein L23
ppo-u.5	7461495	60S ribosomal protein L23
ppo-u.5	7480885	60S ribosomal protein L23
mtr-u.5	25484216	60S ribosomal protein L23
mtr-u.5	11437946	60S ribosomal protein L23
ghi-r.1	107922788	60S ribosomal protein L23
ghi-r.1	107914975	60S ribosomal protein L23
ghi-r.1	107929160	60S ribosomal protein L23
bna-r.1	106438980	60S ribosomal protein L23
bna-r.1	111200416	60S ribosomal protein L23
bna-r.1	106345964	60S ribosomal protein L23
sot-r.1	102598879	60S ribosomal protein L23
sot-r.1	102577734	ribosomal protein L17-like protein
sot-r.1	102587469	60S ribosomal protein L23
cit-r.1	102607109	60S ribosomal protein L23
cit-r.1	102617198	60S ribosomal protein L23
nta-r.1	107817927	large ribosomal subunit protein uL14x/uL14z/uL14y-like
nta-r.1	107832772	large ribosomal subunit protein uL14x/uL14z/uL14y
nta-r.1	107817761	large ribosomal subunit protein uL14-like
cre-r.1	CHLRE_04g211800v5	ribosomal protein L23

Top 50 coexpressed genes to 4331122 (osa-m.8 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4331122 (osa-m.8 coexpression data)

CoexMap"4331122"

[Cytoscape]

Annotation

functional annotation

KEGG

osa03010 [list] [network] Ribosome (386 genes)

GO BP

GO:0006412 [list] [network] translation

(521 genes)

IEA

GO CC

GO:0022625 [list] [network] cytosolic large ribosomal subunit	(132 genes)	IEA
GO:0005840 [list] [network] ribosome	(360 genes)	IEA

GO MF

GO:0070180 [list] [network] large ribosomal subunit rRNA binding	(11 genes)	IEA
GO:0003735 [list] [network] structural constituent of ribosome	(352 genes)	IEA

Protein

NP_001404008.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, chlo 2, plas 1, chlo_mito 1

(predict for NP_001404008.1)

Subcellular
localization
TargetP

mito 7

(predict for NP_001404008.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-m.8 for 4331122	osa-u.5 for 4331122	osa-r.6 for 4331122	osa-e.1 for 4331122	osa-u.5 for 4348846	osa-u.5 for 4331562	tae-r.2 for 123098957	tae-r.2 for 123093708	tae-r.2 for 123045041	hvu-r.1 for 123401590	hvu-r.1 for 123430526	hvu-r.1 for 123449842	bdi-r.1 for 100826448	bdi-r.1 for 100829924	bdi-r.1 for 100838831	zma-u.5 for 100281952	zma-u.5 for 100272919	zma-u.5 for 100303995	sbi-r.1 for 8085517	sbi-r.1 for 8084702	sbi-r.1 for 8059259	ath-u.5 for AT2G33370	ath-u.5 for emb2171	ath-u.5 for AT1G04480	gma-u.5 for 100794110	gma-u.5 for 100786299	gma-u.5 for 100306699	sly-u.5 for 101263520	sly-u.5 for L23	sly-u.5 for 101245201	bra-r.6 for 103859034	bra-r.6 for 103836571	bra-r.6 for 103848919	vvi-u.5 for 100242525	ppo-u.5 for 7459987	ppo-u.5 for 7461495	ppo-u.5 for 7480885	mtr-u.5 for 25484216	mtr-u.5 for 11437946	ghi-r.1 for 107922788	ghi-r.1 for 107914975	ghi-r.1 for 107929160	bna-r.1 for 106438980	bna-r.1 for 111200416	bna-r.1 for 106345964	sot-r.1 for 102598879	sot-r.1 for 102577734	sot-r.1 for 102587469	cit-r.1 for 102607109	cit-r.1 for 102617198	nta-r.1 for 107817927	nta-r.1 for 107832772	nta-r.1 for 107817761	cre-r.1 for CHLRE_04g211800v5

Ortholog

Ortholog ID: 1196

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

emb2171

L23

Function^*

60S ribosomal protein L23

large ribosomal subunit protein uL14

60S ribosomal protein L23

60S ribosomal protein L23-like

60S ribosomal protein L23

60S ribosomal protein L23-like

60S ribosomal protein L23

Ribosomal protein L14p/L23e family protein

60S ribosomal protein L23

uncharacterized LOC100306699

60S ribosomal protein L23

large ribosomal subunit protein uL14

60S ribosomal protein L23

large ribosomal subunit protein uL14

60S ribosomal protein L23

ribosomal protein L17-like protein

60S ribosomal protein L23

large ribosomal subunit protein uL14-like

ribosomal protein L23

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	18
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	21
osa04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	14
hvu04120	Ubiquitin mediated proteolysis	2
hvu03030	DNA replication	2
hvu03420	Nucleotide excision repair	2
hvu03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	17
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	19
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	12
gma03030	DNA replication	2
gma03410	Base excision repair	2
gma03420	Nucleotide excision repair	2
gma03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	18
sly03060	Protein export	2
sly04141	Protein processing in endoplasmic reticulum	2
sly04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	11
sly03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	19

Expression

Expression pattern

Entrez Gene ID^*

4331122

4348846

4331562

123098957

123105893

123139698

123401590

123430526

123449842

100826448

100829924

100838831

100281952

100272919

100193874

8085517

8084702

8059259

817900

819595

839511

100786299

100306699

100811636

543752

101245201

101262859

103859034

103843648

103850047

100242525

7459987

7461495

7480885

25484216

11437946

107930414

121214473

121215257

106402564

106424338

106447630

102598879

102577734

102587469

102607109

102617198

107817761

107783730

142179377

5724241

The preparation time of this page was 0.1 [sec].


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	6	3	3	3	3	3	3	3	3	3	1	3	2	3	3	3	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4331122 (osa-m.8 coexpression data)

Top 50 enrichment test to 4331122 (osa-m.8 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**