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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-m.8   4334955   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 osa-u.5   4334955   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 osa-r.6   4334955   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 osa-e.1   4334955   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 tae-r.2   123050965   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 tae-r.2   123043074   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 tae-r.2   123186928   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 hvu-r.1   123431472   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 bdi-r.1   100840789   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 zma-u.5   100279244   uncharacterized LOC100279244 
 sbi-r.1   8080272   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 ath-u.5   AT4G38890   FMN-linked oxidoreductases superfamily protein 
 gma-u.5   100783494   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 sly-u.5   101268622   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 bra-r.6   103860413   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 vvi-u.5   100262408   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 ppo-u.5   7494292   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 mtr-u.5   11418223   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 ghi-r.1   107903715   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 ghi-r.1   107920288   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 bna-r.1   106434003   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 bna-r.1   106438752   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 sot-r.1   102598558   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 cit-r.1   102621230   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 nta-r.1   107782150   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 nta-r.1   107766363   tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 
 cre-r.1   CHLRE_04g229948v5   uncharacterized protein 

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Top 50 coexpressed genes to 4334955 (osa-m.8 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4334955 (osa-m.8 coexpression data)

CoexMap"4334955"


osaLOC4334955 | Entrez gene ID : 4334955    
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 3 1 1 1 1 1 1 1 1 1 1 1 2 2 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0008033 [list] [network] tRNA processing  (101 genes)  IEA  
GO CC
GO MF
GO:0017150 [list] [network] tRNA dihydrouridine synthase activity  (4 genes)  IEA  
GO:0050660 [list] [network] flavin adenine dinucleotide binding  (161 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1223 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2132 genes)  IEA  
Protein XP_015635918.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1,  plas 1  (predict for XP_015635918.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_015635918.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-m.8
for
4334955
osa-u.5
for
4334955
osa-r.6
for
4334955
osa-e.1
for
4334955
tae-r.2
for
123050965
tae-r.2
for
123043074
tae-r.2
for
123186928
hvu-r.1
for
123431472
bdi-r.1
for
100840789
zma-u.5
for
100279244
sbi-r.1
for
8080272
ath-u.5
for
AT4G38890
gma-u.5
for
100783494
sly-u.5
for
101268622
bra-r.6
for
103860413
vvi-u.5
for
100262408
ppo-u.5
for
7494292
mtr-u.5
for
11418223
ghi-r.1
for
107903715
ghi-r.1
for
107920288
bna-r.1
for
106434003
bna-r.1
for
106438752
sot-r.1
for
102598558
cit-r.1
for
102621230
nta-r.1
for
107782150
nta-r.1
for
107766363
cre-r.1
for
CHLRE_04g229948v5


Ortholog ID: 10910
Species osa tae tae tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC4334955 LOC123050965 LOC123043074 LOC123186928 LOC123431472 LOC100840789 LOC100279244 LOC8080272 AT4G38890 LOC100783494 LOC101268622 LOC103860413 LOC100262408 LOC7494292 LOC11418223 LOC107903715 LOC107920288 LOC106434003 LOC106438752 LOC102598558 LOC102621230 LOC107782150 LOC107766363 CHLRE_04g229948v5
Function* tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like uncharacterized LOC100279244 tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like FMN-linked oxidoreductases superfamily protein tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae00020 Citrate cycle (TCA cycle) 3
tae00620 Pyruvate metabolism 3
tae00785 Lipoic acid metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 5
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 7
sbi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma00250 Alanine, aspartate and glutamate metabolism 2
gma01240 Biosynthesis of cofactors 2
gma00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00230 Purine metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00230 Purine metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot04141 Protein processing in endoplasmic reticulum 3
sot03008 Ribosome biogenesis in eukaryotes 2
sot03022 Basal transcription factors 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4334955 123050965 123043074 123186928 123431472 100840789 100279244 8080272 830044 100783494 101268622 103860413 100262408 7494292 11418223 107903715 107920288 106434003 106438752 102598558 102621230 107782150 107766363 5717942
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