ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-m.8	4336883	V-type proton ATPase subunit G1
osa-u.5	4336883	V-type proton ATPase subunit G1
osa-r.6	4336883	V-type proton ATPase subunit G1
osa-e.1	4336883	V-type proton ATPase subunit G1
osa-u.5	4330438	V-type proton ATPase subunit G 1
tae-r.2	123046553	V-type proton ATPase subunit G1
tae-r.2	123190289	V-type proton ATPase subunit G1
tae-r.2	100146089	V-type proton ATPase subunit G1
hvu-r.1	123427724	V-type proton ATPase subunit G1-like
bdi-r.1	100843047	V-type proton ATPase subunit G1
bdi-r.1	100844839	V-type proton ATPase subunit G1
zma-u.5	100282544	vacuolar ATP synthase subunit G
zma-u.5	100193359	uncharacterized LOC100193359
sbi-r.1	8078424	V-type proton ATPase subunit G1
sbi-r.1	8063923	V-type proton ATPase subunit G1
ath-u.5	VMA10	vacuolar membrane ATPase 10
ath-u.5	VAG2	vacuolar ATP synthase subunit G2
gma-u.5	100306550	uncharacterized LOC100306550
gma-u.5	100499803	uncharacterized LOC100499803
sly-u.5	101258944	V-type proton ATPase subunit G 1
sly-u.5	101254490	V-type proton ATPase subunit G 2
bra-r.6	103870977	V-type proton ATPase subunit G1
bra-r.6	103850074	V-type proton ATPase subunit G1
ppo-u.5	7468415	V-type proton ATPase subunit G 1
mtr-u.5	25484007	V-type proton ATPase subunit G
mtr-u.5	11432938	V-type proton ATPase subunit G1
mtr-u.5	25497458	V-type proton ATPase subunit G1
ghi-r.1	107899649	V-type proton ATPase subunit G1
bna-r.1	106438901	V-type proton ATPase subunit G1-like
bna-r.1	106438454	V-type proton ATPase subunit G2
bna-r.1	106433428	V-type proton ATPase subunit G1-like
sot-r.1	102588223	V-type proton ATPase subunit G 2
sot-r.1	102589825	V-type proton ATPase subunit G 1-like
cit-r.1	102607458	V-type proton ATPase subunit G
nta-r.1	107826961	V-type proton ATPase subunit G 1-like
nta-r.1	107805274	V-type proton ATPase subunit G 1
nta-r.1	107799789	V-type proton ATPase subunit G 2
cre-r.1	CHLRE_11g468550v5	uncharacterized protein

Top 50 coexpressed genes to 4336883 (osa-m.8 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4336883 (osa-m.8 coexpression data)

CoexMap"4336883"

[Cytoscape]

Annotation

functional annotation

KEGG

osa00190 [list] [network] Oxidative phosphorylation (158 genes)

osa04145 [list] [network] Phagosome (85 genes)

GO BP

GO:1902600 [list] [network] proton transmembrane transport

(83 genes)

IEA

GO CC

GO:0016471 [list] [network] vacuolar proton-transporting V-type ATPase complex

(8 genes)

IEA

GO MF

GO:0046961 [list] [network] proton-transporting ATPase activity, rotational mechanism

(26 genes)

IEA

Protein

XP_015636469.1 [sequence] [blastp]
XP_015636470.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 3, chlo_mito 3	(predict for XP_015636469.1)
chlo 4, cyto 3, chlo_mito 3	(predict for XP_015636470.1)

Subcellular
localization
TargetP

mito 6, other 3	(predict for XP_015636469.1)
mito 6, other 3	(predict for XP_015636470.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-m.8 for 4336883	osa-u.5 for 4336883	osa-r.6 for 4336883	osa-e.1 for 4336883	osa-u.5 for 4330438	tae-r.2 for 123046553	tae-r.2 for 123190289	tae-r.2 for 100146089	hvu-r.1 for 123427724	bdi-r.1 for 100843047	bdi-r.1 for 100844839	zma-u.5 for 100282544	zma-u.5 for 100193359	sbi-r.1 for 8078424	sbi-r.1 for 8063923	ath-u.5 for VMA10	ath-u.5 for VAG2	gma-u.5 for 100306550	gma-u.5 for 100499803	sly-u.5 for 101258944	sly-u.5 for 101254490	bra-r.6 for 103870977	bra-r.6 for 103850074	ppo-u.5 for 7468415	mtr-u.5 for 25484007	mtr-u.5 for 11432938	mtr-u.5 for 25497458	ghi-r.1 for 107899649	bna-r.1 for 106438901	bna-r.1 for 106438454	bna-r.1 for 106433428	sot-r.1 for 102588223	sot-r.1 for 102589825	cit-r.1 for 102607458	nta-r.1 for 107826961	nta-r.1 for 107805274	nta-r.1 for 107799789	cre-r.1 for CHLRE_11g468550v5

Ortholog

Ortholog ID: 1579

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

VMA10

VAG2

Function^*

V-type proton ATPase subunit G1

V-type proton ATPase subunit G 1

V-type proton ATPase subunit G1

V-type proton ATPase subunit G1-like

V-type proton ATPase subunit G1

vacuolar ATP synthase subunit G

uncharacterized LOC100193359

V-type proton ATPase subunit G1

vacuolar membrane ATPase 10

vacuolar ATP synthase subunit G2

uncharacterized LOC100499803

V-type proton ATPase subunit G-like protein

V-type proton ATPase subunit G 1

V-type proton ATPase subunit G 2

V-type proton ATPase subunit G1

V-type proton ATPase subunit G-like

V-type proton ATPase subunit G

V-type proton ATPase subunit G 1

V-type proton ATPase subunit G

V-type proton ATPase subunit G1

V-type proton ATPase subunit G2

V-type proton ATPase subunit G 2

V-type proton ATPase subunit G 1-like

V-type proton ATPase subunit G

V-type proton ATPase subunit G 1-like

V-type proton ATPase subunit G 2-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	9
osa04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00860	Porphyrin metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	6
tae04145	Phagosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04145	Phagosome	7
tae00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	7
tae04145	Phagosome	7
tae00630	Glyoxylate and dicarboxylate metabolism	2
tae01200	Carbon metabolism	2
tae03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	9
bdi04145	Phagosome	8
bdi04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	9
bdi04145	Phagosome	8
bdi04142	Lysosome	2
bdi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	10
zma04145	Phagosome	7
zma04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	11
zma04145	Phagosome	9
zma04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	9
sbi04145	Phagosome	5
sbi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	6
sbi04145	Phagosome	4
sbi04146	Peroxisome	3
sbi00071	Fatty acid degradation	2
sbi00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	7
gma04145	Phagosome	4
gma04142	Lysosome	3
gma00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	6
gma04145	Phagosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	4
bra04145	Phagosome	4
bra04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	6
bra04145	Phagosome	2
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	3
vvi04145	Phagosome	3
vvi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	2
vvi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	4
ppo04120	Ubiquitin mediated proteolysis	3
ppo04145	Phagosome	3
ppo03008	Ribosome biogenesis in eukaryotes	2
ppo03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	10
ppo04145	Phagosome	3
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	6
mtr04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01240	Biosynthesis of cofactors	4
mtr00190	Oxidative phosphorylation	2
mtr04145	Phagosome	2
mtr00270	Cysteine and methionine metabolism	2
mtr00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	2
ghi04145	Phagosome	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	2
ghi04145	Phagosome	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	5
bna04145	Phagosome	5
bna00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	10
sot04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	10
sot04145	Phagosome	9
sot04142	Lysosome	6
sot04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	7
cit00190	Oxidative phosphorylation	5
cit00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	6
nta04145	Phagosome	6
nta04141	Protein processing in endoplasmic reticulum	2
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	7
nta04145	Phagosome	7
nta04144	Endocytosis	3
nta04141	Protein processing in endoplasmic reticulum	2
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	11
cre04145	Phagosome	10
cre04142	Lysosome	4
cre03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

4336883

4330438

123046553

123190289

100146089

123427724

100843047

100844839

100282544

100193359

8078424

8063923

821130

828471

100499803

100305477

101258944

101254490

103870977

103850074

100251261

100249863

7468415

7457870

25484007

11432938

25497458

107899649

107948358

106438454

102588223

102589825

102607458

107826961

107804197

5725095

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Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	ppo	mtr	ghi	bna	sot	cit	nta	cre	vvi
Paralog	5	3	1	2	2	2	2	2	2	2	1	3	1	3	2	1	3	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4336883 (osa-m.8 coexpression data)

Top 50 enrichment test to 4336883 (osa-m.8 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**