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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-m.8   4338152   uncharacterized LOC4338152 
 osa-u.5   4338152   uncharacterized LOC4338152 
 osa-r.6   4338152   uncharacterized LOC4338152 
 osa-e.1   4338152   uncharacterized LOC4338152 
 osa-u.5   4327193   uncharacterized LOC4327193 
 tae-r.2   123069353   eukaryotic translation initiation factor 3 subunit L 
 tae-r.2   123060790   eukaryotic translation initiation factor 3 subunit L 
 tae-r.2   123077868   eukaryotic translation initiation factor 3 subunit L 
 hvu-r.1   123443248   eukaryotic translation initiation factor 3 subunit L-like 
 bdi-r.1   100821595   eukaryotic translation initiation factor 3 subunit L 
 zma-u.5   100279318   eukaryotic translation initiation factor 3 subunit 6-interacting protein 
 zma-u.5   103649546   eukaryotic translation initiation factor 3 subunit L-like 
 sbi-r.1   8080370   eukaryotic translation initiation factor 3 subunit L 
 ath-u.5   AT5G25754   RNA polymerase I-associated factor PAF67 
 ath-u.5   AT5G25757   RNA polymerase I-associated factor PAF67 
 gma-u.5   100804691   eukaryotic translation initiation factor 3 subunit L 
 gma-u.5   100786533   eukaryotic translation initiation factor 3 subunit L 
 sly-u.5   101260365   uncharacterized LOC101260365 
 vvi-u.5   100261248   uncharacterized LOC100261248 
 ppo-u.5   7471539   uncharacterized LOC7471539 
 ppo-u.5   7458974   uncharacterized LOC7458974 
 mtr-u.5   25490098   eukaryotic translation initiation factor 3 subunit L 
 ghi-r.1   121229244   eukaryotic translation initiation factor 3 subunit L 
 ghi-r.1   107906949   eukaryotic translation initiation factor 3 subunit L 
 ghi-r.1   107901567   eukaryotic translation initiation factor 3 subunit L 
 bna-r.1   106348766   eukaryotic translation initiation factor 3 subunit L-like 
 bna-r.1   106348547   eukaryotic translation initiation factor 3 subunit L-like 
 sot-r.1   102589649   eukaryotic translation initiation factor 3 subunit L-like 
 cit-r.1   102620355   uncharacterized LOC102620355 
 nta-r.1   107773770   uncharacterized LOC107773770 
 nta-r.1   107766223   uncharacterized LOC107766223 
 cre-r.1   CHLRE_17g697450v5   uncharacterized protein 

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Top 50 coexpressed genes to 4338152 (osa-m.8 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4338152 (osa-m.8 coexpression data)

CoexMap"4338152"


osaLOC4338152 | Entrez gene ID : 4338152      
Species osa tae hvu bdi zma sbi ath gma sly vvi ppo mtr ghi bna sot cit nta cre bra
Paralog 5 3 1 1 2 1 2 2 1 1 2 1 3 2 1 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006413 [list] [network] translational initiation  (49 genes)  IEA  
GO CC
GO:0005852 [list] [network] eukaryotic translation initiation factor 3 complex  (20 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5212 genes)  IEA  
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (60 genes)  IEA  
Protein XP_015639940.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4,  pero 1  (predict for XP_015639940.1)
Subcellular
localization
TargetP
other 7  (predict for XP_015639940.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-m.8
for
4338152
osa-u.5
for
4338152
osa-r.6
for
4338152
osa-e.1
for
4338152
osa-u.5
for
4327193
tae-r.2
for
123069353
tae-r.2
for
123060790
tae-r.2
for
123077868
hvu-r.1
for
123443248
bdi-r.1
for
100821595
zma-u.5
for
100279318
zma-u.5
for
103649546
sbi-r.1
for
8080370
ath-u.5
for
AT5G25754
ath-u.5
for
AT5G25757
gma-u.5
for
100804691
gma-u.5
for
100786533
sly-u.5
for
101260365
vvi-u.5
for
100261248
ppo-u.5
for
7471539
ppo-u.5
for
7458974
mtr-u.5
for
25490098
ghi-r.1
for
121229244
ghi-r.1
for
107906949
ghi-r.1
for
107901567
bna-r.1
for
106348766
bna-r.1
for
106348547
sot-r.1
for
102589649
cit-r.1
for
102620355
nta-r.1
for
107773770
nta-r.1
for
107766223
cre-r.1
for
CHLRE_17g697450v5


Ortholog ID: 7354
Species osa osa tae tae tae hvu bdi zma zma sbi ath ath gma gma sly vvi ppo ppo mtr ghi ghi ghi bna bna sot cit nta nta cre
Symbol LOC4338152 LOC4327193 LOC123069353 LOC123060790 LOC123077868 LOC123443248 LOC100821595 LOC100279318 LOC103649546 LOC8080370 AT5G25754 AT5G25757 LOC100804691 LOC100786533 LOC101260365 LOC100261248 LOC7471539 LOC7458974 LOC25490098 LOC107906949 LOC107901567 LOC107896412 LOC106348766 LOC106348547 LOC102589649 LOC102620355 LOC107773770 LOC107766223 CHLRE_17g697450v5
Function* uncharacterized LOC4338152 uncharacterized LOC4327193 eukaryotic translation initiation factor 3 subunit L eukaryotic translation initiation factor 3 subunit L eukaryotic translation initiation factor 3 subunit L eukaryotic translation initiation factor 3 subunit L-like eukaryotic translation initiation factor 3 subunit L eukaryotic translation initiation factor 3 subunit 6-interacting protein eukaryotic translation initiation factor 3 subunit L-like eukaryotic translation initiation factor 3 subunit L RNA polymerase I-associated factor PAF67 RNA polymerase I-associated factor PAF67 eukaryotic translation initiation factor 3 subunit L eukaryotic translation initiation factor 3 subunit L uncharacterized LOC101260365 uncharacterized LOC100261248 uncharacterized LOC7471539 uncharacterized LOC7458974 eukaryotic translation initiation factor 3 subunit L eukaryotic translation initiation factor 3 subunit L eukaryotic translation initiation factor 3 subunit L eukaryotic translation initiation factor 3 subunit L eukaryotic translation initiation factor 3 subunit L-like eukaryotic translation initiation factor 3 subunit L-like eukaryotic translation initiation factor 3 subunit L-like uncharacterized LOC102620355 uncharacterized LOC107773770 uncharacterized LOC107766223 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00220 Arginine biosynthesis 2
tae00240 Pyrimidine metabolism 2
tae00250 Alanine, aspartate and glutamate metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi00020 Citrate cycle (TCA cycle) 2
vvi00785 Lipoic acid metabolism 2
vvi01200 Carbon metabolism 2
vvi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
ppo00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 3
bna00220 Arginine biosynthesis 2
bna00240 Pyrimidine metabolism 2
bna00250 Alanine, aspartate and glutamate metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 3
bna00220 Arginine biosynthesis 2
bna00240 Pyrimidine metabolism 2
bna00250 Alanine, aspartate and glutamate metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 3
cit04141 Protein processing in endoplasmic reticulum 3
cit03010 Ribosome 3
cit00290 Valine, leucine and isoleucine biosynthesis 2
cit00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4338152 4327193 123069353 123060790 123077868 123443248 100821595 100279318 103649546 8080370 832643 832644 100804691 100786533 101260365 100261248 7471539 7458974 25490098 107906949 107901567 107896412 106348766 106348547 102589649 102620355 107773770 107766223 5717366
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