ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-m.8	4338564	nucleolar protein 16
osa-u.5	4338564	nucleolar protein 16
osa-r.6	4338564	nucleolar protein 16
osa-e.1	4338564	nucleolar protein 16
tae-r.2	123053093	uncharacterized LOC123053093
tae-r.2	123129787	uncharacterized LOC123129787
hvu-r.1	123440468	uncharacterized LOC123440468
bdi-r.1	100830205	nucleolar protein 16
zma-u.5	100276978	uncharacterized LOC100276978
sbi-r.1	8062702	uncharacterized LOC8062702
ath-u.5	AT1G02870	nucleolar-like protein
gma-u.5	100806784	nucleolar protein 16
gma-u.5	100783507	uncharacterized LOC100783507
gma-u.5	100306596	uncharacterized LOC100306596
sly-u.5	101248915	Nop16 domain-containing protein
bra-r.6	103844556	nucleolar protein 16
vvi-u.5	100248599	nucleolar protein 16
ppo-u.5	7491307	nucleolar protein 16
mtr-u.5	11408786	uncharacterized LOC11408786
ghi-r.1	107928465	uncharacterized LOC107928465
ghi-r.1	107913568	uncharacterized LOC107913568
bna-r.1	125587376	nucleolar protein 16-like
bna-r.1	106422918	nucleolar protein 16
bna-r.1	106398403	nucleolar protein 16-like
sot-r.1	102594937	uncharacterized LOC102594937
cit-r.1	102623648	nucleolar protein 16
nta-r.1	107787700	uncharacterized LOC107787700
nta-r.1	107787637	uncharacterized LOC107787637
cre-r.1	CHLRE_17g726650v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0042273 [list] [network] ribosomal large subunit biogenesis

(85 genes)

IEA

GO CC

GO:0005730 [list] [network] nucleolus

(202 genes)

IEA

GO MF

Protein

XP_015637960.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 4, chlo 4, nucl 2, cyto_mito 2, mito_plas 2

(predict for XP_015637960.1)

Subcellular
localization
TargetP

mito 6, other 3

(predict for XP_015637960.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-m.8 for 4338564	osa-u.5 for 4338564	osa-r.6 for 4338564	osa-e.1 for 4338564	tae-r.2 for 123053093	tae-r.2 for 123129787	hvu-r.1 for 123440468	bdi-r.1 for 100830205	zma-u.5 for 100276978	sbi-r.1 for 8062702	ath-u.5 for AT1G02870	gma-u.5 for 100806784	gma-u.5 for 100783507	gma-u.5 for 100306596	sly-u.5 for 101248915	bra-r.6 for 103844556	vvi-u.5 for 100248599	ppo-u.5 for 7491307	mtr-u.5 for 11408786	ghi-r.1 for 107928465	ghi-r.1 for 107913568	bna-r.1 for 125587376	bna-r.1 for 106422918	bna-r.1 for 106398403	sot-r.1 for 102594937	cit-r.1 for 102623648	nta-r.1 for 107787700	nta-r.1 for 107787637	cre-r.1 for CHLRE_17g726650v5

Ortholog

Ortholog ID: 8262

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

nucleolar protein 16

uncharacterized LOC123053093

uncharacterized LOC123129787

uncharacterized LOC123440468

nucleolar protein 16

uncharacterized LOC100276978

uncharacterized LOC8062702

nucleolar-like protein

nucleolar protein 16

uncharacterized LOC100783507

uncharacterized LOC100306596

Nop16 domain-containing protein

nucleolar protein 16

uncharacterized LOC11408786

uncharacterized LOC107928465

uncharacterized LOC107913568

nucleolar protein 16-like

nucleolar protein 16

nucleolar protein 16-like

uncharacterized LOC102594937

nucleolar protein 16

uncharacterized LOC107787700

uncharacterized LOC107787637

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	4
osa03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	7
tae03008	Ribosome biogenesis in eukaryotes	4
tae00260	Glycine, serine and threonine metabolism	3
tae00261	Monobactam biosynthesis	3
tae00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	6
tae00260	Glycine, serine and threonine metabolism	2
tae00261	Monobactam biosynthesis	2
tae00270	Cysteine and methionine metabolism	2
tae00300	Lysine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	7
bdi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03020	RNA polymerase	2
zma03010	Ribosome	2
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	3
ath03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	4
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	2
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	11
ppo03020	RNA polymerase	2
ppo03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	9
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	3
nta00230	Purine metabolism	2
nta01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	3
nta00230	Purine metabolism	2
nta01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03008	Ribosome biogenesis in eukaryotes	3
cre03020	RNA polymerase	2

Expression

Expression pattern

Entrez Gene ID^*

4338564

123053093

123129787

123440468

100830205

100276978

8062702

839496

100806784

100783507

100306596

101248915

103844556

100248599

7491307

11408786

107928465

107913568

125587376

106422918

106398403

102594937

102623648

107787700

107787637

5722794

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4338564 (osa-m.8 coexpression data)

Top 50 enrichment test to 4338564 (osa-m.8 coexpression data)


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	1	1	1	1	1	3	1	1	1	1	1	2	3	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4338564 (osa-m.8 coexpression data)

Top 50 enrichment test to 4338564 (osa-m.8 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**