ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-m.8	4339475	large ribosomal subunit protein eL28z
osa-u.5	4339475	large ribosomal subunit protein eL28z
osa-r.6	4339475	large ribosomal subunit protein eL28z
osa-e.1	4339475	large ribosomal subunit protein eL28z
osa-u.5	4327674	60S ribosomal protein L28-1
osa-u.5	4331176	large ribosomal subunit protein eL28z
tae-r.2	123061763	60S ribosomal protein L28-1
hvu-r.1	123444228	60S ribosomal protein L28-1-like
bdi-r.1	100839094	60S ribosomal protein L28-1
bdi-r.1	100823569	60S ribosomal protein L28-1
zma-u.5	100281129	60S ribosomal protein L28-like
zma-u.5	100284901	60S ribosomal protein L28-like
sbi-r.1	110430020	60S ribosomal protein L28-1-like
sbi-r.1	8059160	60S ribosomal protein L28-1
ath-u.5	AT2G19730	Ribosomal L28e protein family
ath-u.5	AT4G29410	Ribosomal L28e protein family
gma-u.5	100500189	uncharacterized LOC100500189
gma-u.5	100499963	60S ribosomal protein L28-2
gma-u.5	100499921	uncharacterized LOC100499921
sly-u.5	101261128	large ribosomal subunit protein eL28z
sly-u.5	101247801	large ribosomal subunit protein eL28z
sly-u.5	101250778	large ribosomal subunit protein eL28z
bra-r.6	103861890	60S ribosomal protein L28-2
bra-r.6	103837974	60S ribosomal protein L28-1
bra-r.6	103853598	60S ribosomal protein L28-2
vvi-u.5	100261817	large ribosomal subunit protein eL28y
vvi-u.5	100245594	60S ribosomal protein L28-1
ppo-u.5	112326793	60S ribosomal protein L28-1
ppo-u.5	7470595	60S ribosomal protein L28-1
mtr-u.5	11433435	60S ribosomal protein L28-2
mtr-u.5	25500391	60S ribosomal protein L28-2
ghi-r.1	107933946	60S ribosomal protein L28-1
ghi-r.1	107941018	60S ribosomal protein L28-1
ghi-r.1	107937288	60S ribosomal protein L28-1
bna-r.1	106376199	60S ribosomal protein L28-1-like
bna-r.1	106376198	60S ribosomal protein L28-1-like
bna-r.1	106447120	60S ribosomal protein L28-1-like
sot-r.1	102577710	uncharacterized LOC102577710
sot-r.1	102583234	60S ribosomal protein L28-1-like
cit-r.1	102612866	60S ribosomal protein L28-1
nta-r.1	107809779	large ribosomal subunit protein eL28z
nta-r.1	107824985	large ribosomal subunit protein eL28z
nta-r.1	107832157	large ribosomal subunit protein eL28z
cre-r.1	CHLRE_11g467578v5	uncharacterized protein

Top 50 coexpressed genes to 4339475 (osa-m.8 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4339475 (osa-m.8 coexpression data)

CoexMap"4339475"

[Cytoscape]

Annotation

functional annotation

KEGG

osa03010 [list] [network] Ribosome (386 genes)

GO BP

GO:0006412 [list] [network] translation

(521 genes)

IEA

GO CC

GO:0022625 [list] [network] cytosolic large ribosomal subunit	(132 genes)	IEA
GO:0005840 [list] [network] ribosome	(360 genes)	IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome

(352 genes)

IEA

Protein

XP_015639693.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 3, chlo 2, nucl_plas 2

(predict for XP_015639693.1)

Subcellular
localization
TargetP

other 7

(predict for XP_015639693.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-m.8 for 4339475	osa-u.5 for 4339475	osa-r.6 for 4339475	osa-e.1 for 4339475	osa-u.5 for 4327674	osa-u.5 for 4331176	tae-r.2 for 123061763	hvu-r.1 for 123444228	bdi-r.1 for 100839094	bdi-r.1 for 100823569	zma-u.5 for 100281129	zma-u.5 for 100284901	sbi-r.1 for 110430020	sbi-r.1 for 8059160	ath-u.5 for AT2G19730	ath-u.5 for AT4G29410	gma-u.5 for 100500189	gma-u.5 for 100499963	gma-u.5 for 100499921	sly-u.5 for 101261128	sly-u.5 for 101247801	sly-u.5 for 101250778	bra-r.6 for 103861890	bra-r.6 for 103837974	bra-r.6 for 103853598	vvi-u.5 for 100261817	vvi-u.5 for 100245594	ppo-u.5 for 112326793	ppo-u.5 for 7470595	mtr-u.5 for 11433435	mtr-u.5 for 25500391	ghi-r.1 for 107933946	ghi-r.1 for 107941018	ghi-r.1 for 107937288	bna-r.1 for 106376199	bna-r.1 for 106376198	bna-r.1 for 106447120	sot-r.1 for 102577710	sot-r.1 for 102583234	cit-r.1 for 102612866	nta-r.1 for 107809779	nta-r.1 for 107824985	nta-r.1 for 107832157	cre-r.1 for CHLRE_11g467578v5

Ortholog

Ortholog ID: 1451

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

large ribosomal subunit protein eL28z

60S ribosomal protein L28-1

large ribosomal subunit protein eL28z

60S ribosomal protein L28-1

60S ribosomal protein L28-1-like

60S ribosomal protein L28-1

60S ribosomal protein L28-like

60S ribosomal protein L28-1-like

60S ribosomal protein L28-1

Ribosomal L28e protein family

uncharacterized LOC100500189

uncharacterized LOC100499921

uncharacterized LOC100306153

large ribosomal subunit protein eL28z

60S ribosomal protein L28-1

60S ribosomal protein L28-2

60S ribosomal protein L28-1

large ribosomal subunit protein eL28y

60S ribosomal protein L28-1

60S ribosomal protein L28-2

60S ribosomal protein L28-1

60S ribosomal protein L28-1-like

uncharacterized LOC102577710

60S ribosomal protein L28-1-like

60S ribosomal protein L28-1

large ribosomal subunit protein eL28z

large ribosomal subunit protein eL28z-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	18
bdi00300	Lysine biosynthesis	3
bdi01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	12
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	15
bra03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	16
mtr04120	Ubiquitin mediated proteolysis	2
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	9
nta03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	20

Expression

Expression pattern

Entrez Gene ID^*

4339475

4327674

4331176

123061763

123065360

123444228

100839094

100823569

100281129

100284901

110430020

8059160

816492

829062

100500189

100499921

100306153

101261128

101247801

101250778

103837974

103853598

103828285

100261817

100245594

112326793

7470595

11433435

25500391

107937288

121208605

107899912

106376199

106376198

106447120

102577710

102583234

102612866

107824985

142182180

142182182

5726938

The preparation time of this page was 0.2 [sec].


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	6	1	1	2	2	2	2	3	3	3	2	2	2	3	3	2	1	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4339475 (osa-m.8 coexpression data)

Top 50 enrichment test to 4339475 (osa-m.8 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**