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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-m.8   4342575   DNA (cytosine-5)-methyltransferase 1B-like 
 osa-u.5   4342575   DNA (cytosine-5)-methyltransferase 1B-like 
 osa-r.6   4342575   DNA (cytosine-5)-methyltransferase 1B-like 
 osa-e.1   4342575   DNA (cytosine-5)-methyltransferase 1B-like 
 osa-u.5   4334435   DNA (cytosine-5)-methyltransferase 1A-like 
 tae-r.2   123191659   DNA (cytosine-5)-methyltransferase 1B 
 hvu-r.1   123426213   DNA (cytosine-5)-methyltransferase 1B 
 bdi-r.1   100829061   DNA (cytosine-5)-methyltransferase 1B 
 zma-u.5   542082   DNA methyl transferase 1 
 zma-u.5   103632028   DNA (cytosine-5)-methyltransferase 1B 
 sbi-r.1   8061163   DNA (cytosine-5)-methyltransferase 1A 
 sbi-r.1   8060753   DNA (cytosine-5)-methyltransferase 1B 
 ath-u.5   MET1   methyltransferase 1 
 gma-u.5   100802765   DNA (cytosine-5)-methyltransferase 1 
 gma-u.5   100797667   DNA (cytosine-5)-methyltransferase 1 
 sly-u.5   MET1   DNA (cytosine-5)-methyltransferase 1 
 bra-r.6   103842448   DNA (cytosine-5)-methyltransferase 1 
 bra-r.6   103864404   DNA (cytosine-5)-methyltransferase 1 
 vvi-u.5   100240896   DNA (cytosine-5)-methyltransferase 1 
 vvi-u.5   100251127   DNA (cytosine-5)-methyltransferase 1 
 vvi-u.5   100252276   DNA (cytosine-5)-methyltransferase 1B 
 ppo-u.5   112325061   DNA (cytosine-5)-methyltransferase 1 
 ppo-u.5   7463012   DNA (cytosine-5)-methyltransferase 1 
 ppo-u.5   7484095   DNA (cytosine-5)-methyltransferase 1 
 mtr-u.5   11408961   DNA (cytosine-5)-methyltransferase 1 
 mtr-u.5   25486610   DNA (cytosine-5)-methyltransferase 1 
 ghi-r.1   107959775   DNA (cytosine-5)-methyltransferase 1 
 ghi-r.1   107934345   DNA (cytosine-5)-methyltransferase 1 
 bna-r.1   106446455   DNA (cytosine-5)-methyltransferase 1-like 
 bna-r.1   106415488   DNA (cytosine-5)-methyltransferase 1-like 
 bna-r.1   106371341   DNA (cytosine-5)-methyltransferase 1 
 sot-r.1   102604332   DNA (cytosine-5)-methyltransferase 1B-like 
 sot-r.1   102587106   DNA (cytosine-5)-methyltransferase 1B-like 
 cit-r.1   127898681   DNA (cytosine-5)-methyltransferase 1B-like 
 cit-r.1   102616428   DNA (cytosine-5)-methyltransferase 1-like 
 cit-r.1   102627333   DNA (cytosine-5)-methyltransferase 1B-like 
 nta-r.1   107774645   DNA (cytosine-5)-methyltransferase 1B 
 nta-r.1   107759467   DNA (cytosine-5)-methyltransferase 1B-like 
 cre-r.1   CHLRE_10g461750v5   uncharacterized protein 

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Top 50 coexpressed genes to 4342575 (osa-m.8 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4342575 (osa-m.8 coexpression data)

CoexMap"4342575"


osaLOC4342575 | Entrez gene ID : 4342575      
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 5 1 1 1 2 2 1 2 1 2 3 3 2 2 3 2 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa00270 [list] [network] Cysteine and methionine metabolism (127 genes)
GO BP
GO:0044027 [list] [network] negative regulation of gene expression via chromosomal CpG island methylation  (7 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3003 genes)  IEA  
GO MF
GO:0003886 [list] [network] DNA (cytosine-5-)-methyltransferase activity  (6 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (130 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1843 genes)  IEA  
Protein NP_001409175.1 [sequence] [blastp]
XP_025882910.1 [sequence] [blastp]
XP_066168055.1 [sequence] [blastp]
XP_066168056.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 3,  chlo 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001409175.1)
nucl 4,  mito 3,  chlo 1,  cyto_mito 1,  mito_plas 1  (predict for XP_025882910.1)
chlo 6,  cyto 4  (predict for XP_066168055.1)
nucl 5,  cyto 4,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_066168056.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001409175.1)
other 8  (predict for XP_025882910.1)
other 3,  mito 3  (predict for XP_066168055.1)
chlo 4,  other 3  (predict for XP_066168056.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-m.8
for
4342575
osa-u.5
for
4342575
osa-r.6
for
4342575
osa-e.1
for
4342575
osa-u.5
for
4334435
tae-r.2
for
123191659
hvu-r.1
for
123426213
bdi-r.1
for
100829061
zma-u.5
for
542082
zma-u.5
for
103632028
sbi-r.1
for
8061163
sbi-r.1
for
8060753
ath-u.5
for
MET1
gma-u.5
for
100802765
gma-u.5
for
100797667
sly-u.5
for
MET1
bra-r.6
for
103842448
bra-r.6
for
103864404
vvi-u.5
for
100240896
vvi-u.5
for
100251127
vvi-u.5
for
100252276
ppo-u.5
for
112325061
ppo-u.5
for
7463012
ppo-u.5
for
7484095
mtr-u.5
for
11408961
mtr-u.5
for
25486610
ghi-r.1
for
107959775
ghi-r.1
for
107934345
bna-r.1
for
106446455
bna-r.1
for
106415488
bna-r.1
for
106371341
sot-r.1
for
102604332
sot-r.1
for
102587106
cit-r.1
for
127898681
cit-r.1
for
102616428
cit-r.1
for
102627333
nta-r.1
for
107774645
nta-r.1
for
107759467
cre-r.1
for
CHLRE_10g461750v5


Ortholog ID: 3952
Species osa osa tae tae hvu bdi zma zma sbi sbi ath gma gma sly bra bra vvi vvi vvi ppo ppo ppo mtr mtr ghi ghi bna bna bna sot sot cit cit cit nta nta cre
Symbol LOC4342575 LOC4334435 LOC123191659 LOC123044893 LOC123426213 LOC100829061 LOC542082 LOC103632028 LOC8061163 LOC8060753 MET1 LOC100802765 LOC100797667 MET1 LOC103842448 LOC103864404 LOC100240896 LOC100251127 LOC100252276 LOC112325061 LOC7463012 LOC7484095 LOC11408961 LOC25486610 LOC107959775 LOC107934345 LOC106446455 LOC106415488 LOC106371341 LOC102604332 LOC102587106 LOC127898681 LOC102616428 LOC102627333 LOC107774645 LOC107759467 CHLRE_10g461750v5
Function* DNA (cytosine-5)-methyltransferase 1B-like DNA (cytosine-5)-methyltransferase 1A-like DNA (cytosine-5)-methyltransferase 1B DNA (cytosine-5)-methyltransferase 1B DNA (cytosine-5)-methyltransferase 1B DNA (cytosine-5)-methyltransferase 1B DNA methyl transferase 1 DNA (cytosine-5)-methyltransferase 1B DNA (cytosine-5)-methyltransferase 1A DNA (cytosine-5)-methyltransferase 1B methyltransferase 1 DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 1B DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 1-like DNA (cytosine-5)-methyltransferase 1-like DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 1B-like DNA (cytosine-5)-methyltransferase 1B-like DNA (cytosine-5)-methyltransferase 1B-like DNA (cytosine-5)-methyltransferase 1-like DNA (cytosine-5)-methyltransferase 1B-like DNA (cytosine-5)-methyltransferase 1B DNA (cytosine-5)-methyltransferase 1B-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 12
osa03440 Homologous recombination 3
osa03420 Nucleotide excision repair 3
osa03430 Mismatch repair 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 4
osa00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 8
tae00270 Cysteine and methionine metabolism 3
tae03430 Mismatch repair 2
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 10
tae03430 Mismatch repair 8
tae03410 Base excision repair 5
tae03420 Nucleotide excision repair 5
tae00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 4
bdi03430 Mismatch repair 4
bdi03410 Base excision repair 3
bdi03420 Nucleotide excision repair 3
bdi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 3
zma03410 Base excision repair 3
zma00270 Cysteine and methionine metabolism 2
zma03082 ATP-dependent chromatin remodeling 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 3
zma03410 Base excision repair 3
zma00270 Cysteine and methionine metabolism 2
zma03420 Nucleotide excision repair 2
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 6
sbi03410 Base excision repair 3
sbi03420 Nucleotide excision repair 3
sbi03440 Homologous recombination 3
sbi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 11
ath03420 Nucleotide excision repair 4
ath03440 Homologous recombination 4
ath03430 Mismatch repair 3
ath03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 5
gma03420 Nucleotide excision repair 3
gma03430 Mismatch repair 3
gma00270 Cysteine and methionine metabolism 3
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 5
gma03440 Homologous recombination 2
gma00230 Purine metabolism 2
gma00240 Pyrimidine metabolism 2
gma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
sly00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 4
bra03440 Homologous recombination 4
bra03420 Nucleotide excision repair 2
bra03430 Mismatch repair 2
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00270 Cysteine and methionine metabolism 2
vvi00330 Arginine and proline metabolism 2
vvi01200 Carbon metabolism 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00270 Cysteine and methionine metabolism 3
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 11
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00270 Cysteine and methionine metabolism 3
ppo00230 Purine metabolism 2
ppo00240 Pyrimidine metabolism 2
ppo00480 Glutathione metabolism 2
ppo01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03420 Nucleotide excision repair 3
mtr03440 Homologous recombination 3
mtr03460 Fanconi anemia pathway 3
mtr00270 Cysteine and methionine metabolism 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 11
ghi00270 Cysteine and methionine metabolism 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 11
ghi00270 Cysteine and methionine metabolism 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna03030 DNA replication 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 7
bna00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 7
bna00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
sot00240 Pyrimidine metabolism 2
sot00480 Glutathione metabolism 2
sot01232 Nucleotide metabolism 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 3
sot00230 Purine metabolism 2
sot00240 Pyrimidine metabolism 2
sot00480 Glutathione metabolism 2
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 3
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4342575 4334435 123191659 123044893 123426213 100829061 542082 103632028 8061163 8060753 834975 100802765 100797667 543721 103842448 103864404 100240896 100251127 100252276 112325061 7463012 7484095 11408961 25486610 107959775 107934345 106446455 106415488 106371341 102604332 102587106 127898681 102616428 102627333 107774645 107759467 5723973
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