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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-m.8   4345219   pentatricopeptide repeat-containing protein At5g65560 
 osa-u.5   4345219   pentatricopeptide repeat-containing protein At5g65560 
 osa-r.6   4345219   pentatricopeptide repeat-containing protein At5g65560 
 osa-e.1   4345219   pentatricopeptide repeat-containing protein At5g65560 
 tae-r.2   123147024   pentatricopeptide repeat-containing protein At5g65560 
 tae-r.2   123162453   pentatricopeptide repeat-containing protein At5g65560 
 tae-r.2   123168981   pentatricopeptide repeat-containing protein At5g65560 
 hvu-r.1   123407438   pentatricopeptide repeat-containing protein At5g65560 
 bdi-r.1   100825018   pentatricopeptide repeat-containing protein At5g65560 
 zma-u.5   103643142   pentatricopeptide repeat-containing protein At5g65560 
 sbi-r.1   8083535   pentatricopeptide repeat-containing protein At5g65560 

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Top 50 coexpressed genes to 4345219 (osa-m.8 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4345219 (osa-m.8 coexpression data)

CoexMap"4345219"


osaLOC4345219 | Entrez gene ID : 4345219      
Species osa tae hvu bdi zma sbi cre vvi bra ath ppo mtr nta bna gma cit sly ghi sot
Paralog 4 3 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031930 [list] [network] mitochondria-nucleus signaling pathway  (13 genes)  IEA  
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (14 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (655 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_015650984.1 [sequence] [blastp]
XP_015650985.1 [sequence] [blastp]
XP_015650986.1 [sequence] [blastp]
XP_015650990.1 [sequence] [blastp]
XP_015650992.1 [sequence] [blastp]
XP_015650993.1 [sequence] [blastp]
XP_015650994.1 [sequence] [blastp]
XP_015650995.1 [sequence] [blastp]
XP_015650996.1 [sequence] [blastp]
XP_066159571.1 [sequence] [blastp]
XP_066159572.1 [sequence] [blastp]
XP_066159573.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_015650984.1)
chlo 8,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_015650985.1)
chlo 8,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_015650986.1)
chlo 8,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_015650990.1)
chlo 8,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_015650992.1)
chlo 8,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_015650993.1)
chlo 8,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_015650994.1)
chlo 8,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_015650995.1)
chlo 8,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_015650996.1)
chlo 8,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_066159571.1)
chlo 8,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_066159572.1)
chlo 8,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_066159573.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_015650984.1)
chlo 8  (predict for XP_015650985.1)
chlo 8  (predict for XP_015650986.1)
chlo 8  (predict for XP_015650990.1)
chlo 8  (predict for XP_015650992.1)
chlo 8  (predict for XP_015650993.1)
chlo 8  (predict for XP_015650994.1)
chlo 8  (predict for XP_015650995.1)
chlo 8  (predict for XP_015650996.1)
chlo 8  (predict for XP_066159571.1)
chlo 8  (predict for XP_066159572.1)
chlo 8  (predict for XP_066159573.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-m.8
for
4345219
osa-u.5
for
4345219
osa-r.6
for
4345219
osa-e.1
for
4345219
tae-r.2
for
123147024
tae-r.2
for
123162453
tae-r.2
for
123168981
hvu-r.1
for
123407438
bdi-r.1
for
100825018
zma-u.5
for
103643142
sbi-r.1
for
8083535


Ortholog ID: 16970
Species osa tae tae tae hvu bdi zma sbi
Symbol LOC4345219 LOC123147024 LOC123162453 LOC123168981 LOC123407438 LOC100825018 LOC103643142 LOC8083535
Function* pentatricopeptide repeat-containing protein At5g65560 pentatricopeptide repeat-containing protein At5g65560 pentatricopeptide repeat-containing protein At5g65560 pentatricopeptide repeat-containing protein At5g65560 pentatricopeptide repeat-containing protein At5g65560 pentatricopeptide repeat-containing protein At5g65560 pentatricopeptide repeat-containing protein At5g65560 pentatricopeptide repeat-containing protein At5g65560
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03040 Spliceosome 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03020 RNA polymerase 2
zma04120 Ubiquitin mediated proteolysis 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4345219 123147024 123162453 123168981 123407438 100825018 103643142 8083535
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