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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   PAP1   phosphatidic acid phosphatase 1 
 ath-u.5   PAP1   phosphatidic acid phosphatase 1 
 ath-r.7   PAP1   phosphatidic acid phosphatase 1 
 ath-e.2   PAP1   phosphatidic acid phosphatase 1 
 ath-m.4.bio   PAP1   phosphatidic acid phosphatase 1 
 ath-m.4.hor   PAP1   phosphatidic acid phosphatase 1 
 ath-m.4.lig   PAP1   phosphatidic acid phosphatase 1 
 ath-m.4.str   PAP1   phosphatidic acid phosphatase 1 
 ath-m.4.tis   PAP1   phosphatidic acid phosphatase 1 
 ath-u.5   LPP3   lipid phosphate phosphatase 3 
 ath-u.5   LPP2   lipid phosphate phosphatase 2 
 bra-r.6   103870909   putative lipid phosphate phosphatase 3, chloroplastic 
 bra-r.6   103858975   putative lipid phosphate phosphatase 3, chloroplastic 
 bra-r.6   103842921   lipid phosphate phosphatase 2 
 bna-r.1   125575568   putative lipid phosphate phosphatase 3, chloroplastic 
 bna-r.1   125574889   putative lipid phosphate phosphatase 3, chloroplastic 
 ghi-r.1   107899377   putative lipid phosphate phosphatase 3, chloroplastic 
 ghi-r.1   107904046   lipid phosphate phosphatase 2 
 cit-r.1   102609919   lipid phosphate phosphatase 2-like 
 cit-r.1   102610220   lipid phosphate phosphatase 2-like 
 cit-r.1   102622378   lipid phosphate phosphatase 2-like 
 gma-u.5   100800585   putative lipid phosphate phosphatase 3, chloroplastic-like 
 gma-u.5   100785459   lipid phosphate phosphatase 2-like 
 vvi-u.5   100241275   putative lipid phosphate phosphatase 3, chloroplastic 
 vvi-u.5   100259291   lipid phosphate phosphatase 2 
 vvi-u.5   100254175   lipid phosphate phosphatase 2 
 ppo-u.5   18099446   putative lipid phosphate phosphatase 3, chloroplastic 
 ppo-u.5   7459816   putative lipid phosphate phosphatase 3, chloroplastic 
 ppo-u.5   7488376   putative lipid phosphate phosphatase 3, chloroplastic 
 mtr-u.5   11436764   lipid phosphate phosphatase 2 
 mtr-u.5   25485465   lipid phosphate phosphatase 2 
 sly-u.5   101267988   lipid phosphate phosphatase 2 
 sly-u.5   101260497   lipid phosphate phosphatase 2 
 sly-u.5   101257361   probable lipid phosphate phosphatase 4 
 sot-r.1   102581130   lipid phosphate phosphatase 2-like 
 sot-r.1   102590836   putative lipid phosphate phosphatase 3, chloroplastic 
 nta-r.1   107777374   putative lipid phosphate phosphatase 3, chloroplastic 
 nta-r.1   107791050   lipid phosphate phosphatase 2 
 nta-r.1   107821019   putative lipid phosphate phosphatase 3, chloroplastic 
 osa-u.5   4326857   lipid phosphate phosphatase 2 
 osa-u.5   4345366   lipid phosphate phosphatase 2 
 zma-u.5   100280353   Lipid phosphate phosphatase 2 
 zma-u.5   100502288   Lipid phosphate phosphatase 2 
 zma-u.5   100273865   uncharacterized LOC100273865 
 tae-r.2   123088169   lipid phosphate phosphatase 2 
 tae-r.2   123078747   lipid phosphate phosphatase 2 
 tae-r.2   123077031   lipid phosphate phosphatase 2 
 hvu-r.1   123452614   lipid phosphate phosphatase 2 
 hvu-r.1   123449143   lipid phosphate phosphatase 2-like 
 sbi-r.1   110436818   lipid phosphate phosphatase 2-like 
 bdi-r.1   100822115   lipid phosphate phosphatase 2 
 bdi-r.1   100839202   lipid phosphate phosphatase 2 
 cre-r.1   CHLRE_05g230900v5   uncharacterized protein 

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Top 50 coexpressed genes to PAP1 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PAP1 (ath-m.9 coexpression data)

CoexMap"814646"


athPAP1 | Entrez gene ID : 814646      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 11 3 2 2 3 2 3 3 2 3 2 3 2 3 3 2 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00561 [list] [network] Glycerolipid metabolism (71 genes)
ath00564 [list] [network] Glycerophospholipid metabolism (99 genes)
GO BP
GO:0010224 [list] [network] response to UV-B  (85 genes)  IEP  
GO:0006644 [list] [network] phospholipid metabolic process  (119 genes)  NAS  
GO:0071456 [list] [network] cellular response to hypoxia  (241 genes)  HEP  
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0008195 [list] [network] phosphatidate phosphatase activity  (8 genes)  IDA  
Protein NP_001318171.1 [sequence] [blastp]
NP_001323948.1 [sequence] [blastp]
NP_001323949.1 [sequence] [blastp]
NP_001323950.1 [sequence] [blastp]
NP_001323951.1 [sequence] [blastp]
NP_001323952.1 [sequence] [blastp]
NP_565255.1 [sequence] [blastp]
NP_973389.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  golg 2  (predict for NP_001318171.1)
plas 4,  E.R. 3,  vacu 2,  golg_plas 2  (predict for NP_001323948.1)
plas 8,  E.R. 1  (predict for NP_001323949.1)
plas 7,  golg 2  (predict for NP_001323950.1)
plas 4,  E.R. 3,  vacu 2,  golg_plas 2  (predict for NP_001323951.1)
plas 7,  E.R. 1,  vacu 1,  golg 1,  cyto_E.R. 1  (predict for NP_001323952.1)
plas 7,  golg 2  (predict for NP_565255.1)
plas 8,  E.R. 1  (predict for NP_973389.1)
Subcellular
localization
TargetP
chlo 2  (predict for NP_001318171.1)
other 5,  chlo 4  (predict for NP_001323948.1)
other 9,  mito 4  (predict for NP_001323949.1)
chlo 2  (predict for NP_001323950.1)
other 5,  chlo 4  (predict for NP_001323951.1)
other 9  (predict for NP_001323952.1)
chlo 2  (predict for NP_565255.1)
other 9,  mito 4  (predict for NP_973389.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
PAP1
ath-u.5
for
PAP1
ath-r.7
for
PAP1
ath-e.2
for
PAP1
ath-m.4.bio
for
PAP1
ath-m.4.hor
for
PAP1
ath-m.4.lig
for
PAP1
ath-m.4.str
for
PAP1
ath-m.4.tis
for
PAP1
ath-u.5
for
LPP3
ath-u.5
for
LPP2
bra-r.6
for
103870909
bra-r.6
for
103858975
bra-r.6
for
103842921
bna-r.1
for
125575568
bna-r.1
for
125574889
ghi-r.1
for
107899377
ghi-r.1
for
107904046
cit-r.1
for
102609919
cit-r.1
for
102610220
cit-r.1
for
102622378
gma-u.5
for
100800585
gma-u.5
for
100785459
vvi-u.5
for
100241275
vvi-u.5
for
100259291
vvi-u.5
for
100254175
ppo-u.5
for
18099446
ppo-u.5
for
7459816
ppo-u.5
for
7488376
mtr-u.5
for
11436764
mtr-u.5
for
25485465
sly-u.5
for
101267988
sly-u.5
for
101260497
sly-u.5
for
101257361
sot-r.1
for
102581130
sot-r.1
for
102590836
nta-r.1
for
107777374
nta-r.1
for
107791050
nta-r.1
for
107821019
osa-u.5
for
4326857
osa-u.5
for
4345366
zma-u.5
for
100280353
zma-u.5
for
100502288
zma-u.5
for
100273865
tae-r.2
for
123088169
tae-r.2
for
123078747
tae-r.2
for
123077031
hvu-r.1
for
123452614
hvu-r.1
for
123449143
sbi-r.1
for
110436818
bdi-r.1
for
100822115
bdi-r.1
for
100839202
cre-r.1
for
CHLRE_05g230900v5


Ortholog ID: 553
Species ath ath bra bra bra bna bna bna ghi ghi cit cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot nta nta osa osa osa zma zma tae hvu sbi sbi bdi bdi bdi cre
Symbol PAP1 LPP3 LOC103858975 LOC103842921 LOC103839503 LOC106365467 LOC106382859 LOC106438945 LOC107960069 LOC107960070 LOC102609919 LOC102610220 LOC102622378 LOC100785459 LOC100784929 LOC100805924 LOC100241275 LOC100242178 LOC7488376 LOC7477450 LOC7459815 LOC25485465 LOC11440130 LOC101267988 LOC101268277 LOC101268570 LOC102581130 LOC102590836 LOC107777374 LOC107813721 LOC4345366 LOC4345367 LOC4325649 LOC100280353 LOC100502288 LOC123111680 LOC123449143 LOC8083459 LOC110432554 LOC100839202 LOC100830036 LOC100838994 CHLRE_05g230900v5
Function* phosphatidic acid phosphatase 1 lipid phosphate phosphatase 3 putative lipid phosphate phosphatase 3, chloroplastic lipid phosphate phosphatase 2 lipid phosphate phosphatase 1 lipid phosphate phosphatase 2 putative lipid phosphate phosphatase 3, chloroplastic putative lipid phosphate phosphatase 3, chloroplastic lipid phosphate phosphatase 2 lipid phosphate phosphatase 2 lipid phosphate phosphatase 2-like lipid phosphate phosphatase 2-like lipid phosphate phosphatase 2-like lipid phosphate phosphatase 2-like lipid phosphate phosphatase 1-like lipid phosphate phosphatase 2-like putative lipid phosphate phosphatase 3, chloroplastic lipid phosphate phosphatase 2 putative lipid phosphate phosphatase 3, chloroplastic lipid phosphate phosphatase 2 lipid phosphate phosphatase 2 lipid phosphate phosphatase 2 lipid phosphate phosphatase 2 lipid phosphate phosphatase 2 lipid phosphate phosphatase 2-like putative lipid phosphate phosphatase 3, chloroplastic lipid phosphate phosphatase 2-like putative lipid phosphate phosphatase 3, chloroplastic putative lipid phosphate phosphatase 3, chloroplastic lipid phosphate phosphatase 2-like lipid phosphate phosphatase 2 lipid phosphate phosphatase 2 lipid phosphate phosphatase 2 Lipid phosphate phosphatase 2 Lipid phosphate phosphatase 2 lipid phosphate phosphatase 2 lipid phosphate phosphatase 2-like lipid phosphate phosphatase 2 lipid phosphate phosphatase 2-like lipid phosphate phosphatase 2 lipid phosphate phosphatase 2 putative lipid phosphate phosphatase 3, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
ath04075 Plant hormone signal transduction 2
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00260 Glycine, serine and threonine metabolism 3
ath00630 Glyoxylate and dicarboxylate metabolism 2
ath00670 One carbon pool by folate 2
ath00785 Lipoic acid metabolism 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00100 Steroid biosynthesis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 4
bna00564 Glycerophospholipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 4
bna00564 Glycerophospholipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi04626 Plant-pathogen interaction 4
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03083 Polycomb repressive complex 2
cit04120 Ubiquitin mediated proteolysis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
gma00564 Glycerophospholipid metabolism 2
gma00040 Pentose and glucuronate interconversions 2
gma00053 Ascorbate and aldarate metabolism 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 2
gma00410 beta-Alanine metabolism 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 4
gma00561 Glycerolipid metabolism 2
gma00564 Glycerophospholipid metabolism 2
gma00270 Cysteine and methionine metabolism 2
gma00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00561 Glycerolipid metabolism 2
vvi00564 Glycerophospholipid metabolism 2
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr03060 Protein export 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00561 Glycerolipid metabolism 2
sly00564 Glycerophospholipid metabolism 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00561 Glycerolipid metabolism 2
sly00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 2
sot00920 Sulfur metabolism 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
sot01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00564 Glycerophospholipid metabolism 3
sot00250 Alanine, aspartate and glutamate metabolism 2
sot00410 beta-Alanine metabolism 2
sot00430 Taurine and hypotaurine metabolism 2
sot00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 3
zma00561 Glycerolipid metabolism 2
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae03013 Nucleocytoplasmic transport 3
tae04120 Ubiquitin mediated proteolysis 3
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814646 821299 103858975 103842921 103839503 106365467 106382859 106438945 107960069 107960070 102609919 102610220 102622378 100785459 100784929 100805924 100241275 100242178 7488376 7477450 7459815 25485465 11440130 101267988 101268277 101268570 102581130 102590836 107777374 107813721 4345366 4345367 4325649 100280353 100502288 123111680 123449143 8083459 110432554 100839202 100830036 100838994 5727801
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