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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT2G21960   uncharacterized protein 
 ath-u.5   AT2G21960   uncharacterized protein 
 ath-r.7   AT2G21960   uncharacterized protein 
 ath-e.2   AT2G21960   uncharacterized protein 
 ath-m.4.bio   AT2G21960   uncharacterized protein 
 ath-m.4.hor   AT2G21960   uncharacterized protein 
 ath-m.4.lig   AT2G21960   uncharacterized protein 
 ath-m.4.str   AT2G21960   uncharacterized protein 
 ath-m.4.tis   AT2G21960   uncharacterized protein 
 bra-r.6   103864311   uncharacterized LOC103864311 
 bna-r.1   106375913   uncharacterized LOC106375913 
 bna-r.1   106420566   uncharacterized LOC106420566 
 ghi-r.1   107950373   uncharacterized LOC107950373 
 ghi-r.1   121203111   uncharacterized LOC121203111 
 cit-r.1   102628213   hypothetical protein 
 gma-u.5   100807209   uncharacterized LOC100807209 
 gma-u.5   100306288   uncharacterized LOC100306288 
 vvi-u.5   100264638   uncharacterized LOC100264638 
 ppo-u.5   7477130   uncharacterized LOC7477130 
 mtr-u.5   120577608   uncharacterized LOC120577608 
 sly-u.5   101250205   uncharacterized LOC101250205 
 sot-r.1   102584063   uncharacterized LOC102584063 
 nta-r.1   107776320   uncharacterized LOC107776320 
 nta-r.1   107771755   uncharacterized LOC107771755 
 osa-u.5   4337160   uncharacterized LOC4337160 
 zma-u.5   100272947   uncharacterized LOC100272947 
 tae-r.2   123047182   uncharacterized LOC123047182 
 tae-r.2   123054989   uncharacterized LOC123054989 
 tae-r.2   123190841   uncharacterized LOC123190841 
 hvu-r.1   123428212   uncharacterized LOC123428212 
 sbi-r.1   8068457   uncharacterized LOC8068457 
 bdi-r.1   100846062   uncharacterized LOC100846062 
 cre-r.1   CHLRE_08g379200v5   uncharacterized protein 
 cre-r.1   CHLRE_08g379175v5   uncharacterized protein 

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Top 50 coexpressed genes to AT2G21960 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G21960 (ath-m.9 coexpression data)

CoexMap"816732"


athAT2G21960 | Entrez gene ID : 816732      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006508 [list] [network] proteolysis  (361 genes)  IEA  
GO CC
GO:0009534 [list] [network] chloroplast thylakoid  (417 genes)  HDA  
GO:0005773 [list] [network] vacuole  (984 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (19 genes)  IEA  
GO:0004222 [list] [network] metalloendopeptidase activity  (35 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (321 genes)  IEA  
Protein NP_565523.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  plas 1,  extr 1,  pero 1,  mito_plas 1  (predict for NP_565523.1)
Subcellular
localization
TargetP
chlo 7,  mito 3  (predict for NP_565523.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT2G21960
ath-u.5
for
AT2G21960
ath-r.7
for
AT2G21960
ath-e.2
for
AT2G21960
ath-m.4.bio
for
AT2G21960
ath-m.4.hor
for
AT2G21960
ath-m.4.lig
for
AT2G21960
ath-m.4.str
for
AT2G21960
ath-m.4.tis
for
AT2G21960
bra-r.6
for
103864311
bna-r.1
for
106375913
bna-r.1
for
106420566
ghi-r.1
for
107950373
ghi-r.1
for
121203111
cit-r.1
for
102628213
gma-u.5
for
100807209
gma-u.5
for
100306288
vvi-u.5
for
100264638
ppo-u.5
for
7477130
mtr-u.5
for
120577608
sly-u.5
for
101250205
sot-r.1
for
102584063
nta-r.1
for
107776320
nta-r.1
for
107771755
osa-u.5
for
4337160
zma-u.5
for
100272947
tae-r.2
for
123047182
tae-r.2
for
123054989
tae-r.2
for
123190841
hvu-r.1
for
123428212
sbi-r.1
for
8068457
bdi-r.1
for
100846062
cre-r.1
for
CHLRE_08g379200v5
cre-r.1
for
CHLRE_08g379175v5


Ortholog ID: 9395
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre cre
Symbol AT2G21960 LOC103864311 LOC106375913 LOC106420566 LOC107950373 LOC121203111 LOC102628213 LOC100807209 LOC100306288 LOC100264638 LOC7477130 LOC120577608 LOC101250205 LOC102584063 LOC107776320 LOC107771755 LOC4337160 LOC100272947 LOC123047182 LOC123054989 LOC123190841 LOC123428212 LOC8068457 LOC100846062 CHLRE_08g379200v5 CHLRE_08g379175v5
Function* uncharacterized protein uncharacterized LOC103864311 uncharacterized LOC106375913 uncharacterized LOC106420566 uncharacterized LOC107950373 uncharacterized LOC121203111 hypothetical protein uncharacterized LOC100807209 uncharacterized LOC100306288 uncharacterized LOC100264638 uncharacterized LOC7477130 uncharacterized LOC120577608 uncharacterized LOC101250205 uncharacterized LOC102584063 uncharacterized LOC107776320 uncharacterized LOC107771755 uncharacterized LOC4337160 uncharacterized LOC100272947 uncharacterized LOC123047182 uncharacterized LOC123054989 uncharacterized LOC123190841 uncharacterized LOC123428212 uncharacterized LOC8068457 uncharacterized LOC100846062 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 5
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00710 Carbon fixation by Calvin cycle 4
ghi01200 Carbon metabolism 4
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00710 Carbon fixation by Calvin cycle 4
ghi01200 Carbon metabolism 4
ghi00562 Inositol phosphate metabolism 2
ghi00920 Sulfur metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 7
gma00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
gma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00630 Glyoxylate and dicarboxylate metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 4
sly00630 Glyoxylate and dicarboxylate metabolism 3
sly00710 Carbon fixation by Calvin cycle 3
sly00260 Glycine, serine and threonine metabolism 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta00906 Carotenoid biosynthesis 2
nta03082 ATP-dependent chromatin remodeling 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 3
sbi00620 Pyruvate metabolism 2
sbi00710 Carbon fixation by Calvin cycle 2
sbi00460 Cyanoamino acid metabolism 2
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816732 103864311 106375913 106420566 107950373 121203111 102628213 100807209 100306288 100264638 7477130 120577608 101250205 102584063 107776320 107771755 4337160 100272947 123047182 123054989 123190841 123428212 8068457 100846062 5719891 66054491
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