Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT2G25420   transducin family protein / WD-40 repeat family protein 
 ath-u.5   AT2G25420   transducin family protein / WD-40 repeat family protein 
 ath-r.7   AT2G25420   transducin family protein / WD-40 repeat family protein 
 ath-e.2   AT2G25420   transducin family protein / WD-40 repeat family protein 
 ath-m.4.bio   AT2G25420   transducin family protein / WD-40 repeat family protein 
 ath-m.4.hor   AT2G25420   transducin family protein / WD-40 repeat family protein 
 ath-m.4.lig   AT2G25420   transducin family protein / WD-40 repeat family protein 
 ath-m.4.str   AT2G25420   transducin family protein / WD-40 repeat family protein 
 ath-m.4.tis   AT2G25420   transducin family protein / WD-40 repeat family protein 
 bra-r.6   103858364   topless-related protein 4 
 bna-r.1   106397239   protein TOPLESS 
 bna-r.1   106438395   topless-related protein 4 
 cit-r.1   102624793   topless-related protein 1 

close


Top 50 coexpressed genes to AT2G25420 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT2G25420 (ath-m.9 coexpression data)

CoexMap"817080"


athAT2G25420 | Entrez gene ID : 817080      
Species ath bra bna cit cre vvi ppo mtr hvu nta tae bdi osa gma zma sly ghi sot sbi
Paralog 9 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEA  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001325217.1 [sequence] [blastp]
NP_001325218.1 [sequence] [blastp]
NP_001325219.1 [sequence] [blastp]
NP_565594.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  extr 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001325217.1)
nucl 6,  cyto 1,  extr 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001325218.1)
nucl 5,  chlo 1,  cyto 1,  extr 1  (predict for NP_001325219.1)
nucl 5,  chlo 1,  cyto 1,  extr 1  (predict for NP_565594.3)
Subcellular
localization
TargetP
scret 8,  other 5  (predict for NP_001325217.1)
scret 8,  other 5  (predict for NP_001325218.1)
scret 8,  other 5  (predict for NP_001325219.1)
scret 8,  other 5  (predict for NP_565594.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT2G25420
ath-u.5
for
AT2G25420
ath-r.7
for
AT2G25420
ath-e.2
for
AT2G25420
ath-m.4.bio
for
AT2G25420
ath-m.4.hor
for
AT2G25420
ath-m.4.lig
for
AT2G25420
ath-m.4.str
for
AT2G25420
ath-m.4.tis
for
AT2G25420
bra-r.6
for
103858364
bna-r.1
for
106397239
bna-r.1
for
106438395
cit-r.1
for
102624793


Ortholog ID: 20612
Species ath bra bna bna cit
Symbol AT2G25420 LOC103858364 LOC106397239 LOC106438395 LOC102624793
Function* transducin family protein / WD-40 repeat family protein topless-related protein 4 protein TOPLESS topless-related protein 4 topless-related protein 1
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817080 103858364 106397239 106438395 102624793
The preparation time of this page was 0.0 [sec].