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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT2G28390   SAND family protein 
 ath-u.5   AT2G28390   SAND family protein 
 ath-r.7   AT2G28390   SAND family protein 
 ath-e.2   AT2G28390   SAND family protein 
 ath-m.4.bio   AT2G28390   SAND family protein 
 ath-m.4.hor   AT2G28390   SAND family protein 
 ath-m.4.lig   AT2G28390   SAND family protein 
 ath-m.4.str   AT2G28390   SAND family protein 
 ath-m.4.tis   AT2G28390   SAND family protein 
 bra-r.6   103829738   vacuolar fusion protein MON1 homolog 
 bra-r.6   103858297   vacuolar fusion protein MON1 homolog 
 bna-r.1   106352591   vacuolar fusion protein MON1 homolog 
 bna-r.1   106430496   vacuolar fusion protein MON1 homolog 
 bna-r.1   111212796   vacuolar fusion protein MON1 homolog 
 ghi-r.1   107963877   vacuolar fusion protein MON1 homolog 
 ghi-r.1   107906227   vacuolar fusion protein MON1 homolog 
 ghi-r.1   107940118   vacuolar fusion protein MON1 homolog 
 cit-r.1   102625488   vacuolar fusion protein MON1 homolog 
 gma-u.5   100816794   vacuolar fusion protein MON1 homolog 
 gma-u.5   100814534   vacuolar fusion protein MON1 homolog 
 vvi-u.5   SAND   SAND family 
 ppo-u.5   18098198   vacuolar fusion protein MON1 homolog 
 ppo-u.5   7463985   vacuolar fusion protein MON1 homolog 
 mtr-u.5   11411455   vacuolar fusion protein MON1 homolog 
 mtr-u.5   25492445   vacuolar fusion protein MON1 homolog 
 sly-u.5   101256369   Mon1 superfamily protein 
 sot-r.1   102594647   protein SAND 
 nta-r.1   107764450   vacuolar fusion protein MON1 homolog 
 nta-r.1   107818978   vacuolar fusion protein MON1 homolog 
 nta-r.1   107831467   vacuolar fusion protein MON1 homolog 
 osa-u.5   4324304   vacuolar fusion protein MON1 homolog 
 zma-u.5   100282740   MON1 
 tae-r.2   123072893   vacuolar fusion protein MON1 homolog 
 tae-r.2   123072892   vacuolar fusion protein MON1 homolog 
 tae-r.2   123081047   vacuolar fusion protein MON1 homolog 
 hvu-r.1   123445741   vacuolar fusion protein MON1 homolog 
 sbi-r.1   8074143   vacuolar fusion protein MON1 homolog 
 bdi-r.1   100845386   vacuolar fusion protein MON1 homolog 
 cre-r.1   CHLRE_03g154500v5   uncharacterized protein 

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Top 50 coexpressed genes to AT2G28390 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G28390 (ath-m.9 coexpression data)

CoexMap"817387"


athAT2G28390 | Entrez gene ID : 817387      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 1 2 1 2 2 1 1 3 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045324 [list] [network] late endosome to vacuole transport  (23 genes)  IMP  
GO:0006623 [list] [network] protein targeting to vacuole  (31 genes)  IEA  
GO:0007033 [list] [network] vacuole organization  (45 genes)  IMP  
GO:0006886 [list] [network] intracellular protein transport  (149 genes)  IMP  
GO:0099402 [list] [network] plant organ development  (1167 genes)  IMP  
GO CC
GO:0005768 [list] [network] endosome  (359 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_029426.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  vacu 1,  E.R. 1,  cysk 1,  E.R._vacu 1  (predict for NP_029426.1)
Subcellular
localization
TargetP
chlo 8,  other 4  (predict for NP_029426.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT2G28390
ath-u.5
for
AT2G28390
ath-r.7
for
AT2G28390
ath-e.2
for
AT2G28390
ath-m.4.bio
for
AT2G28390
ath-m.4.hor
for
AT2G28390
ath-m.4.lig
for
AT2G28390
ath-m.4.str
for
AT2G28390
ath-m.4.tis
for
AT2G28390
bra-r.6
for
103829738
bra-r.6
for
103858297
bna-r.1
for
106352591
bna-r.1
for
106430496
bna-r.1
for
111212796
ghi-r.1
for
107963877
ghi-r.1
for
107906227
ghi-r.1
for
107940118
cit-r.1
for
102625488
gma-u.5
for
100816794
gma-u.5
for
100814534
vvi-u.5
for
SAND
ppo-u.5
for
18098198
ppo-u.5
for
7463985
mtr-u.5
for
11411455
mtr-u.5
for
25492445
sly-u.5
for
101256369
sot-r.1
for
102594647
nta-r.1
for
107764450
nta-r.1
for
107818978
nta-r.1
for
107831467
osa-u.5
for
4324304
zma-u.5
for
100282740
tae-r.2
for
123072893
tae-r.2
for
123072892
tae-r.2
for
123081047
hvu-r.1
for
123445741
sbi-r.1
for
8074143
bdi-r.1
for
100845386
cre-r.1
for
CHLRE_03g154500v5


Ortholog ID: 4688
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT2G28390 LOC103829738 LOC103858297 LOC106352591 LOC106430496 LOC111214062 LOC107940118 LOC107961956 LOC107962777 LOC102625488 LOC100816794 LOC100814534 SAND LOC18098198 LOC7463985 LOC11411455 LOC25492445 LOC101256369 LOC102594647 LOC107818978 LOC107831467 LOC107803393 LOC4324304 LOC100282740 LOC123072892 LOC123081047 LOC123139194 LOC123445741 LOC8074143 LOC100845386 CHLRE_03g154500v5
Function* SAND family protein vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog SAND family vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog Mon1 superfamily protein protein SAND vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog MON1 vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog vacuolar fusion protein MON1 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 4
ath03013 Nucleocytoplasmic transport 3
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 4
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00230 Purine metabolism 2
ppo00240 Pyrimidine metabolism 2
ppo01232 Nucleotide metabolism 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
mtr04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 3
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly03013 Nucleocytoplasmic transport 2
sly04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta03022 Basal transcription factors 2
nta04141 Protein processing in endoplasmic reticulum 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00561 Glycerolipid metabolism 2
osa00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
zma03040 Spliceosome 3
zma03015 mRNA surveillance pathway 2
zma04016 MAPK signaling pathway - plant 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 7
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00480 Glutathione metabolism 3
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817387 103829738 103858297 106352591 106430496 111214062 107940118 107961956 107962777 102625488 100816794 100814534 100265538 18098198 7463985 11411455 25492445 101256369 102594647 107818978 107831467 107803393 4324304 100282740 123072892 123081047 123139194 123445741 8074143 100845386 5723083
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