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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   IMB1   Transcription factor GTE6 
 ath-u.5   IMB1   Transcription factor GTE6 
 ath-r.7   IMB1   Transcription factor GTE6 
 ath-e.2   IMB1   Transcription factor GTE6 
 ath-m.4.bio   IMB1   Transcription factor GTE6 
 ath-m.4.hor   IMB1   Transcription factor GTE6 
 ath-m.4.lig   IMB1   Transcription factor GTE6 
 ath-m.4.str   IMB1   Transcription factor GTE6 
 ath-m.4.tis   IMB1   Transcription factor GTE6 
 ath-u.5   GTE6   general transcription factor group E6 
 bra-r.6   103860755   transcription factor GTE6 
 bra-r.6   103867408   transcription factor GTE1 
 bna-r.1   106448480   transcription factor GTE6 
 bna-r.1   106441207   transcription factor GTE1 
 bna-r.1   106409517   transcription factor GTE6 
 ghi-r.1   107945269   transcription factor GTE1 
 ghi-r.1   107934174   transcription factor GTE6 
 ghi-r.1   107915901   transcription factor GTE6 
 cit-r.1   102612893   transcription factor GTE1 
 cit-r.1   102616636   transcription factor GTE1 
 gma-u.5   100797746   transcription factor GTE6 
 gma-u.5   100818490   transcription factor GTE1 
 vvi-u.5   100852419   transcription factor GTE6 
 vvi-u.5   100244465   transcription factor GTE6 
 ppo-u.5   7457882   transcription factor GTE6 
 ppo-u.5   7477778   transcription factor GTE1 
 ppo-u.5   7489638   transcription factor GTE6 
 mtr-u.5   11443617   transcription factor GTE6 
 mtr-u.5   11418545   transcription factor GTE1 
 sly-u.5   101260850   transcription factor GTE6-like 
 sly-u.5   101257215   transcription factor GTE6-like 
 sot-r.1   102580769   transcription factor GTE1-like 
 sot-r.1   102590597   transcription factor GTE6-like 
 nta-r.1   107828504   transcription factor GTE6 
 nta-r.1   107788034   transcription factor GTE6-like 
 nta-r.1   107791724   transcription factor GTE1 
 osa-u.5   4340051   transcription factor GTE1 
 zma-u.5   100191869   uncharacterized LOC100191869 
 tae-r.2   123065699   transcription factor GTE1 
 tae-r.2   123087901   transcription factor GTE1 
 tae-r.2   123143202   transcription factor GTE1 
 hvu-r.1   123452387   transcription factor GTE1-like 
 hvu-r.1   123409378   transcription factor GTE1-like 
 sbi-r.1   8068418   transcription factor GTE1 
 bdi-r.1   100827335   transcription factor GTE1 
 cre-r.1   CHLRE_03g168050v5   uncharacterized protein 

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Top 50 coexpressed genes to IMB1 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to IMB1 (ath-m.9 coexpression data)

CoexMap"818055"


athIMB1 | Entrez gene ID : 818055      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 3 3 2 2 2 3 2 2 2 3 1 1 3 2 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010030 [list] [network] positive regulation of seed germination  (25 genes)  IMP  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (262 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_181036.2 [sequence] [blastp]
NP_973602.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  cysk 1  (predict for NP_181036.2)
chlo 4,  nucl 4,  cyto 1  (predict for NP_973602.1)
Subcellular
localization
TargetP
other 9  (predict for NP_181036.2)
mito 7,  other 4  (predict for NP_973602.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
IMB1
ath-u.5
for
IMB1
ath-r.7
for
IMB1
ath-e.2
for
IMB1
ath-m.4.bio
for
IMB1
ath-m.4.hor
for
IMB1
ath-m.4.lig
for
IMB1
ath-m.4.str
for
IMB1
ath-m.4.tis
for
IMB1
ath-u.5
for
GTE6
bra-r.6
for
103860755
bra-r.6
for
103867408
bna-r.1
for
106448480
bna-r.1
for
106441207
bna-r.1
for
106409517
ghi-r.1
for
107945269
ghi-r.1
for
107934174
ghi-r.1
for
107915901
cit-r.1
for
102612893
cit-r.1
for
102616636
gma-u.5
for
100797746
gma-u.5
for
100818490
vvi-u.5
for
100852419
vvi-u.5
for
100244465
ppo-u.5
for
7457882
ppo-u.5
for
7477778
ppo-u.5
for
7489638
mtr-u.5
for
11443617
mtr-u.5
for
11418545
sly-u.5
for
101260850
sly-u.5
for
101257215
sot-r.1
for
102580769
sot-r.1
for
102590597
nta-r.1
for
107828504
nta-r.1
for
107788034
nta-r.1
for
107791724
osa-u.5
for
4340051
zma-u.5
for
100191869
tae-r.2
for
123065699
tae-r.2
for
123087901
tae-r.2
for
123143202
hvu-r.1
for
123452387
hvu-r.1
for
123409378
sbi-r.1
for
8068418
bdi-r.1
for
100827335
cre-r.1
for
CHLRE_03g168050v5


Ortholog ID: 3315
Species ath ath bra bra bna bna bna ghi ghi ghi cit cit gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sot sot nta nta nta osa zma tae tae tae hvu hvu sbi bdi cre
Symbol IMB1 GTE6 LOC103860755 LOC103867408 LOC106448480 LOC106409517 LOC125600630 LOC107945269 LOC107926131 LOC107899451 LOC102612893 LOC102616636 LOC100797746 LOC100818490 LOC100852419 LOC100244465 LOC7457882 LOC7477778 LOC7489638 LOC11443617 LOC25495920 LOC101260850 LOC101257215 LOC102580769 LOC102590597 LOC107828504 LOC107788034 LOC107824470 LOC4340051 LOC100191869 LOC123087901 LOC123143202 LOC123182865 LOC123452387 LOC123409378 LOC8068418 LOC100827335 CHLRE_03g168050v5
Function* Transcription factor GTE6 general transcription factor group E6 transcription factor GTE6 transcription factor GTE1 transcription factor GTE6 transcription factor GTE6 transcription factor GTE1-like transcription factor GTE1 transcription factor GTE6 transcription factor GTE6 transcription factor GTE1 transcription factor GTE1 transcription factor GTE6 transcription factor GTE1 transcription factor GTE6 transcription factor GTE6 transcription factor GTE6 transcription factor GTE1 transcription factor GTE6 transcription factor GTE6 transcription factor GTE6 transcription factor GTE6-like transcription factor GTE6-like transcription factor GTE1-like transcription factor GTE6-like transcription factor GTE6 transcription factor GTE6-like transcription factor GTE1 transcription factor GTE1 uncharacterized LOC100191869 transcription factor GTE1 transcription factor GTE1 transcription factor GTE1 transcription factor GTE1-like transcription factor GTE1-like transcription factor GTE1 transcription factor GTE1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath04122 Sulfur relay system 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03420 Nucleotide excision repair 3
bra00970 Aminoacyl-tRNA biosynthesis 3
bra03030 DNA replication 2
bra03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03440 Homologous recombination 2
nta03013 Nucleocytoplasmic transport 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03440 Homologous recombination 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 5
osa00600 Sphingolipid metabolism 2
osa04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae00564 Glycerophospholipid metabolism 3
tae00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818055 824393 103860755 103867408 106448480 106409517 125600630 107945269 107926131 107899451 102612893 102616636 100797746 100818490 100852419 100244465 7457882 7477778 7489638 11443617 25495920 101260850 101257215 102580769 102590597 107828504 107788034 107824470 4340051 100191869 123087901 123143202 123182865 123452387 123409378 8068418 100827335 5728991
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