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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT2G35260   CAAX protease self-immunity protein 
 ath-u.5   AT2G35260   CAAX protease self-immunity protein 
 ath-r.7   AT2G35260   CAAX protease self-immunity protein 
 ath-e.2   AT2G35260   CAAX protease self-immunity protein 
 ath-m.4.bio   AT2G35260   CAAX protease self-immunity protein 
 ath-m.4.hor   AT2G35260   CAAX protease self-immunity protein 
 ath-m.4.lig   AT2G35260   CAAX protease self-immunity protein 
 ath-m.4.str   AT2G35260   CAAX protease self-immunity protein 
 ath-m.4.tis   AT2G35260   CAAX protease self-immunity protein 
 ath-u.5   AT4G17840   CAAX protease self-immunity protein 
 bra-r.6   103857564   uncharacterized LOC103857564 
 bra-r.6   103867377   uncharacterized LOC103867377 
 bra-r.6   103860948   uncharacterized LOC103860948 
 bna-r.1   111211093   uncharacterized LOC111211093 
 bna-r.1   106440212   uncharacterized LOC106440212 
 bna-r.1   106437849   uncharacterized LOC106437849 
 ghi-r.1   107933592   uncharacterized LOC107933592 
 ghi-r.1   107918389   uncharacterized LOC107918389 
 cit-r.1   102630012   hypothetical protein 
 gma-u.5   100818224   uncharacterized LOC100818224 
 gma-u.5   G   protein STAY-GREEN 
 vvi-u.5   100247252   uncharacterized LOC100247252 
 ppo-u.5   18094177   uncharacterized LOC18094177 
 mtr-u.5   11434435   uncharacterized LOC11434435 
 sly-u.5   G   protein STAY-GREEN 
 sot-r.1   102599907   uncharacterized LOC102599907 
 nta-r.1   107821626   uncharacterized LOC107821626 
 nta-r.1   107767045   uncharacterized LOC107767045 
 osa-u.5   107275868   uncharacterized LOC107275868 
 zma-u.5   100217228   uncharacterized LOC100217228 
 tae-r.2   123099186   uncharacterized LOC123099186 
 tae-r.2   123106150   uncharacterized LOC123106150 
 tae-r.2   123093991   uncharacterized LOC123093991 
 hvu-r.1   123450074   uncharacterized LOC123450074 
 sbi-r.1   8075930   uncharacterized LOC8075930 
 bdi-r.1   100822795   uncharacterized LOC100822795 

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Top 50 coexpressed genes to AT2G35260 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G35260 (ath-m.9 coexpression data)

CoexMap"818093"


athAT2G35260 | Entrez gene ID : 818093      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071586 [list] [network] CAAX-box protein processing  (7 genes)  IEA  
GO:0010380 [list] [network] regulation of chlorophyll biosynthetic process  (26 genes)  IMP  
GO CC
GO:0042651 [list] [network] thylakoid membrane  (348 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0004222 [list] [network] metalloendopeptidase activity  (35 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_565802.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_565802.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_565802.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT2G35260
ath-u.5
for
AT2G35260
ath-r.7
for
AT2G35260
ath-e.2
for
AT2G35260
ath-m.4.bio
for
AT2G35260
ath-m.4.hor
for
AT2G35260
ath-m.4.lig
for
AT2G35260
ath-m.4.str
for
AT2G35260
ath-m.4.tis
for
AT2G35260
ath-u.5
for
AT4G17840
bra-r.6
for
103857564
bra-r.6
for
103867377
bra-r.6
for
103860948
bna-r.1
for
111211093
bna-r.1
for
106440212
bna-r.1
for
106437849
ghi-r.1
for
107933592
ghi-r.1
for
107918389
cit-r.1
for
102630012
gma-u.5
for
100818224
gma-u.5
for
G
vvi-u.5
for
100247252
ppo-u.5
for
18094177
mtr-u.5
for
11434435
sly-u.5
for
G
sot-r.1
for
102599907
nta-r.1
for
107821626
nta-r.1
for
107767045
osa-u.5
for
107275868
zma-u.5
for
100217228
tae-r.2
for
123099186
tae-r.2
for
123106150
tae-r.2
for
123093991
hvu-r.1
for
123450074
sbi-r.1
for
8075930
bdi-r.1
for
100822795


Ortholog ID: 6829
Species ath ath bra bra bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT2G35260 AT4G17840 LOC103857564 LOC103867377 LOC103860948 LOC111211093 LOC106440212 LOC106410249 LOC107933592 LOC107918389 LOC102630012 LOC100818224 G LOC100247252 LOC18094177 LOC11434435 G LOC102599907 LOC107821626 LOC107767045 LOC107275868 LOC100217228 LOC123099186 LOC123106150 LOC123093991 LOC123450074 LOC8075930 LOC100822795
Function* CAAX protease self-immunity protein CAAX protease self-immunity protein uncharacterized LOC103857564 uncharacterized LOC103867377 uncharacterized LOC103860948 uncharacterized LOC111211093 uncharacterized LOC106440212 uncharacterized LOC106410249 uncharacterized LOC107933592 uncharacterized LOC107918389 hypothetical protein uncharacterized LOC100818224 protein STAY-GREEN uncharacterized LOC100247252 uncharacterized LOC18094177 uncharacterized LOC11434435 protein STAY-GREEN uncharacterized LOC102599907 uncharacterized LOC107821626 uncharacterized LOC107767045 uncharacterized LOC107275868 uncharacterized LOC100217228 uncharacterized LOC123099186 uncharacterized LOC123106150 uncharacterized LOC123093991 uncharacterized LOC123450074 uncharacterized LOC8075930 uncharacterized LOC100822795
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 5
ath00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ath00350 Tyrosine metabolism 2
ath00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 3
bra00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 5
bra00860 Porphyrin metabolism 4
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
bra00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 2
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00630 Glyoxylate and dicarboxylate metabolism 3
cit00260 Glycine, serine and threonine metabolism 2
cit00670 One carbon pool by folate 2
cit00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 10
gma00196 Photosynthesis - antenna proteins 4
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 6
gma00196 Photosynthesis - antenna proteins 4
gma00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 8
vvi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 5
ppo00196 Photosynthesis - antenna proteins 2
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 6
sly01240 Biosynthesis of cofactors 2
sly00710 Carbon fixation by Calvin cycle 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 5
sot00900 Terpenoid backbone biosynthesis 2
sot00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 8
nta00860 Porphyrin metabolism 6
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 8
nta00860 Porphyrin metabolism 6
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 5
osa00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00010 Glycolysis / Gluconeogenesis 2
zma00030 Pentose phosphate pathway 2
zma00051 Fructose and mannose metabolism 2
zma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 15
tae00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 3
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 7
sbi00860 Porphyrin metabolism 3
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00196 Photosynthesis - antenna proteins 8
bdi04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818093 827507 103857564 103867377 103860948 111211093 106440212 106410249 107933592 107918389 102630012 100818224 100787147 100247252 18094177 11434435 101260158 102599907 107821626 107767045 107275868 100217228 123099186 123106150 123093991 123450074 8075930 100822795
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