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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT2G42710   Ribosomal protein L1p/L10e family 
 ath-u.5   AT2G42710   Ribosomal protein L1p/L10e family 
 ath-r.7   AT2G42710   Ribosomal protein L1p/L10e family 
 ath-e.2   AT2G42710   Ribosomal protein L1p/L10e family 
 ath-m.4.bio   AT2G42710   Ribosomal protein L1p/L10e family 
 ath-m.4.hor   AT2G42710   Ribosomal protein L1p/L10e family 
 ath-m.4.lig   AT2G42710   Ribosomal protein L1p/L10e family 
 ath-m.4.str   AT2G42710   Ribosomal protein L1p/L10e family 
 ath-m.4.tis   AT2G42710   Ribosomal protein L1p/L10e family 
 bra-r.6   103866668   50S ribosomal protein L1 
 bna-r.1   106361773   50S ribosomal protein L1-like 
 bna-r.1   106377407   50S ribosomal protein L1 
 ghi-r.1   107886943   50S ribosomal protein L1 
 ghi-r.1   107908840   50S ribosomal protein L1 
 cit-r.1   102627029   uncharacterized LOC102627029 
 gma-u.5   100809322   50S ribosomal protein L1 
 gma-u.5   100802973   50S ribosomal protein L1 
 vvi-u.5   100257519   uncharacterized LOC100257519 
 ppo-u.5   7466300   uncharacterized LOC7466300 
 mtr-u.5   11408457   50S ribosomal protein L1 
 sly-u.5   101253561   uncharacterized LOC101253561 
 sot-r.1   102583569   50S ribosomal protein L1 
 nta-r.1   107782852   uncharacterized LOC107782852 
 nta-r.1   107782853   uncharacterized LOC107782853 
 nta-r.1   107778475   uncharacterized LOC107778475 
 osa-u.5   4341246   uncharacterized LOC4341246 
 zma-u.5   100282763   Ribosomal protein L1p/L10e family-like 
 tae-r.2   123164955   50S ribosomal protein L1 
 tae-r.2   123156903   50S ribosomal protein L1 
 tae-r.2   123147948   50S ribosomal protein L1 
 hvu-r.1   123408416   50S ribosomal protein L1 
 sbi-r.1   8061930   50S ribosomal protein L1 
 bdi-r.1   100845571   50S ribosomal protein L1 

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Top 50 coexpressed genes to AT2G42710 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G42710 (ath-m.9 coexpression data)

CoexMap"818871"


athAT2G42710 | Entrez gene ID : 818871      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 3 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006412 [list] [network] translation  (926 genes)  IEA  
GO CC
GO:0015934 [list] [network] large ribosomal subunit  (133 genes)  IEA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (75 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_850375.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 8,  chlo 2  (predict for NP_850375.1)
Subcellular
localization
TargetP
mito 7,  chlo 6  (predict for NP_850375.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT2G42710
ath-u.5
for
AT2G42710
ath-r.7
for
AT2G42710
ath-e.2
for
AT2G42710
ath-m.4.bio
for
AT2G42710
ath-m.4.hor
for
AT2G42710
ath-m.4.lig
for
AT2G42710
ath-m.4.str
for
AT2G42710
ath-m.4.tis
for
AT2G42710
bra-r.6
for
103866668
bna-r.1
for
106361773
bna-r.1
for
106377407
ghi-r.1
for
107886943
ghi-r.1
for
107908840
cit-r.1
for
102627029
gma-u.5
for
100809322
gma-u.5
for
100802973
vvi-u.5
for
100257519
ppo-u.5
for
7466300
mtr-u.5
for
11408457
sly-u.5
for
101253561
sot-r.1
for
102583569
nta-r.1
for
107782852
nta-r.1
for
107782853
nta-r.1
for
107778475
osa-u.5
for
4341246
zma-u.5
for
100282763
tae-r.2
for
123164955
tae-r.2
for
123156903
tae-r.2
for
123147948
hvu-r.1
for
123408416
sbi-r.1
for
8061930
bdi-r.1
for
100845571


Ortholog ID: 10044
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT2G42710 LOC103866668 LOC106361773 LOC106377407 LOC107886943 LOC107908840 LOC102627029 LOC100809322 LOC100802973 LOC100257519 LOC7466300 LOC11408457 LOC101253561 LOC102583569 LOC107782852 LOC107782853 LOC107778475 LOC4341246 LOC100282763 LOC123164955 LOC123156903 LOC123147948 LOC123408416 LOC8061930 LOC100845571
Function* Ribosomal protein L1p/L10e family 50S ribosomal protein L1 50S ribosomal protein L1-like 50S ribosomal protein L1 50S ribosomal protein L1 50S ribosomal protein L1 uncharacterized LOC102627029 50S ribosomal protein L1 50S ribosomal protein L1 uncharacterized LOC100257519 uncharacterized LOC7466300 50S ribosomal protein L1 uncharacterized LOC101253561 50S ribosomal protein L1 uncharacterized LOC107782852 uncharacterized LOC107782853 uncharacterized LOC107778475 uncharacterized LOC4341246 Ribosomal protein L1p/L10e family-like 50S ribosomal protein L1 50S ribosomal protein L1 50S ribosomal protein L1 50S ribosomal protein L1 50S ribosomal protein L1 50S ribosomal protein L1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 8
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03008 Ribosome biogenesis in eukaryotes 2
gma00230 Purine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
sot03008 Ribosome biogenesis in eukaryotes 3
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 3
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818871 103866668 106361773 106377407 107886943 107908840 102627029 100809322 100802973 100257519 7466300 11408457 101253561 102583569 107782852 107782853 107778475 4341246 100282763 123164955 123156903 123147948 123408416 8061930 100845571
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