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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G07870   F-box and associated interaction domains-containing protein 
 ath-u.5   AT3G07870   F-box and associated interaction domains-containing protein 
 ath-r.7   AT3G07870   F-box and associated interaction domains-containing protein 
 ath-e.2   AT3G07870   F-box and associated interaction domains-containing protein 
 ath-m.4.bio   AT3G07870   F-box and associated interaction domains-containing protein 
 ath-m.4.hor   AT3G07870   F-box and associated interaction domains-containing protein 
 ath-m.4.lig   AT3G07870   F-box and associated interaction domains-containing protein 
 ath-m.4.str   AT3G07870   F-box and associated interaction domains-containing protein 
 ath-m.4.tis   AT3G07870   F-box and associated interaction domains-containing protein 
 ath-u.5   AT3G06240   F-box family protein 
 ath-u.5   AT3G23880   F-box and associated interaction domains-containing protein 
 ath-u.5   CPR1   F-box and associated interaction domains-containing protein 
 bra-r.6   103859144   F-box/kelch-repeat protein At3g06240 
 bna-r.1   125594169   F-box protein At4g22390-like 
 bna-r.1   111206595   F-box protein CPR1-like 
 ghi-r.1   107895289   F-box protein At3g07870 
 ghi-r.1   107910977   F-box protein At3g07870 
 gma-u.5   102666879   F-box/kelch-repeat protein At3g06240 
 ppo-u.5   7454236   F-box/kelch-repeat protein At3g23880 
 ppo-u.5   7455978   F-box protein At3g07870 
 mtr-u.5   120580159   F-box/kelch-repeat protein At3g06240 
 sly-u.5   101260412   F-box/kelch-repeat protein At3g06240 
 sot-r.1   107062523   F-box/kelch-repeat protein At3g06240-like 
 sot-r.1   102605926   F-box/kelch-repeat protein At3g23880 
 nta-r.1   107775756   F-box protein CPR1-like 
 nta-r.1   107777906   F-box/kelch-repeat protein At3g23880-like 
 bdi-r.1   100823474   F-box/LRR-repeat protein At2g43260 

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Top 50 coexpressed genes to AT3G07870 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G07870 (ath-m.9 coexpression data)

CoexMap"819978"


athAT3G07870 | Entrez gene ID : 819978      
Species ath bra bna ghi gma ppo mtr sly sot nta bdi hvu vvi osa tae zma cre sbi cit
Paralog 12 1 2 2 1 2 1 1 2 2 1 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0008284 [list] [network] positive regulation of cell population proliferation  (27 genes)  IMP  
GO CC
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_566322.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  cyto 3,  chlo 1,  mito 1,  cysk 1  (predict for NP_566322.1)
Subcellular
localization
TargetP
other 9  (predict for NP_566322.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G07870
ath-u.5
for
AT3G07870
ath-r.7
for
AT3G07870
ath-e.2
for
AT3G07870
ath-m.4.bio
for
AT3G07870
ath-m.4.hor
for
AT3G07870
ath-m.4.lig
for
AT3G07870
ath-m.4.str
for
AT3G07870
ath-m.4.tis
for
AT3G07870
ath-u.5
for
AT3G06240
ath-u.5
for
AT3G23880
ath-u.5
for
CPR1
bra-r.6
for
103859144
bna-r.1
for
125594169
bna-r.1
for
111206595
ghi-r.1
for
107895289
ghi-r.1
for
107910977
gma-u.5
for
102666879
ppo-u.5
for
7454236
ppo-u.5
for
7455978
mtr-u.5
for
120580159
sly-u.5
for
101260412
sot-r.1
for
107062523
sot-r.1
for
102605926
nta-r.1
for
107775756
nta-r.1
for
107777906
bdi-r.1
for
100823474


Ortholog ID: 25
Species ath ath bra bna ghi ghi gma gma gma vvi mtr mtr sly sot nta nta nta bdi
Symbol AT3G07870 AT3G06240 LOC103859247 LOC106388992 LOC107888906 LOC107920139 LOC100809732 LOC100789763 LOC100789250 LOC100253229 LOC11407622 LOC25483269 LOC101244418 LOC107062273 LOC107824897 LOC107792385 LOC107793667 LOC100823474
Function* F-box and associated interaction domains-containing protein F-box family protein F-box protein At3g07870 F-box protein At3g07870-like F-box/kelch-repeat protein At3g06240 F-box/kelch-repeat protein At3g23880 F-box/kelch-repeat protein At3g06240 F-box protein CPR1 putative F-box protein F-box protein CPR1 F-box/kelch-repeat protein At3g23880 F-box/kelch-repeat protein At3g23880 F-box/kelch-repeat protein At3g23880-like F-box/kelch-repeat protein At3g06240-like F-box/kelch-repeat protein At3g23880 F-box/kelch-repeat protein At3g23880-like F-box/kelch-repeat protein At3g23880-like F-box/LRR-repeat protein At2g43260
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna00480 Glutathione metabolism 2
bna00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta03430 Mismatch repair 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819978 819798 103859247 106388992 107888906 107920139 100809732 100789763 100789250 100253229 11407622 25483269 101244418 107062273 107824897 107792385 107793667 100823474
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