ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	AT3G08680	Leucine-rich repeat protein kinase family protein
ath-u.5	AT3G08680	Leucine-rich repeat protein kinase family protein
ath-r.7	AT3G08680	Leucine-rich repeat protein kinase family protein
ath-e.2	AT3G08680	Leucine-rich repeat protein kinase family protein
ath-m.4.bio	AT3G08680	Leucine-rich repeat protein kinase family protein
ath-m.4.hor	AT3G08680	Leucine-rich repeat protein kinase family protein
ath-m.4.lig	AT3G08680	Leucine-rich repeat protein kinase family protein
ath-m.4.str	AT3G08680	Leucine-rich repeat protein kinase family protein
ath-m.4.tis	AT3G08680	Leucine-rich repeat protein kinase family protein
ath-u.5	AT5G58300	Leucine-rich repeat protein kinase family protein
bra-r.6	103870602	probable inactive receptor kinase At3g08680
bra-r.6	103848802	probable inactive receptor kinase At3g08680
bna-r.1	106435691	probable inactive receptor kinase At5g58300
bna-r.1	106387560	probable inactive receptor kinase At5g58300
bna-r.1	106387165	probable inactive receptor kinase At5g58300
ghi-r.1	107910652	probable inactive receptor kinase At5g58300
ghi-r.1	107896844	probable inactive receptor kinase At5g58300
ghi-r.1	107887318	probable inactive receptor kinase At5g58300
cit-r.1	102613089	probable inactive receptor kinase At5g58300
cit-r.1	102627189	probable inactive receptor kinase At5g58300
cit-r.1	102622990	probable inactive receptor kinase At5g58300
gma-u.5	100776232	probable inactive receptor kinase At5g58300
gma-u.5	100786831	probable inactive receptor kinase At5g58300
gma-u.5	100786974	probable inactive receptor kinase At5g58300
vvi-u.5	100255050	probable inactive receptor kinase At5g58300
vvi-u.5	100241663	probable inactive receptor kinase At5g58300
ppo-u.5	18108350	probable inactive receptor kinase At5g58300
ppo-u.5	7494654	probable inactive receptor kinase At5g58300
mtr-u.5	11435321	probable inactive receptor kinase At5g58300
mtr-u.5	25489807	probable inactive receptor kinase At5g58300
mtr-u.5	11440175	probable inactive receptor kinase At5g58300
sly-u.5	101263638	probable inactive receptor kinase At5g58300
sly-u.5	101252259	probable inactive receptor kinase At5g58300
sly-u.5	101268878	probable inactive receptor kinase At5g58300
sot-r.1	102594475	probable inactive receptor kinase At5g58300
sot-r.1	102587960	probable inactive receptor kinase At5g58300
nta-r.1	107802339	putative inactive receptor kinase At5g58300
nta-r.1	107761564	putative inactive receptor kinase At5g58300
nta-r.1	107770175	putative inactive receptor kinase At5g58300
osa-u.5	4327447	probable inactive receptor kinase At5g58300
osa-u.5	4339119	probable inactive receptor kinase At5g58300
zma-u.5	100191484	putative leucine-rich repeat receptor-like protein kinase family protein
zma-u.5	100381972	probable inactive receptor kinase At5g58300
zma-u.5	103630495	probable inactive receptor kinase At5g58300
tae-r.2	123079568	probable inactive receptor kinase At5g58300
tae-r.2	123060142	probable inactive receptor kinase At5g58300
tae-r.2	123062429	probable inactive receptor kinase At5g58300
hvu-r.1	123444714	probable inactive receptor kinase At5g58300
hvu-r.1	123444618	probable inactive receptor kinase At5g58300
sbi-r.1	8055303	probable inactive receptor kinase At5g58300
sbi-r.1	8077010	probable inactive receptor kinase At5g58300
bdi-r.1	100838882	probable inactive receptor kinase At5g58300
bdi-r.1	100821199	probable inactive receptor kinase At5g58300

Top 50 coexpressed genes to AT3G08680 (ath-m.9 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT3G08680 (ath-m.9 coexpression data)

CoexMap"820015"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009505 [list] [network] plant-type cell wall	(504 genes)	HDA
GO:0009506 [list] [network] plasmodesma	(874 genes)	HDA
GO:0005829 [list] [network] cytosol	(2593 genes)	HDA
GO:0005886 [list] [network] plasma membrane	(2598 genes)	HDA
GO:0005576 [list] [network] extracellular region	(3158 genes)	ISM

GO MF

GO:0004672 [list] [network] protein kinase activity	(737 genes)	IEA
GO:0016301 [list] [network] kinase activity	(1055 genes)	ISS
GO:0005515 [list] [network] protein binding	(5363 genes)	IPI

Protein

NP_187480.1 [sequence] [blastp]
NP_974257.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 7, E.R. 1, mito 1, pero 1, E.R._vacu 1, cyto_E.R. 1	(predict for NP_187480.1)
plas 7, E.R. 1, mito 1, pero 1, E.R._vacu 1, cyto_E.R. 1	(predict for NP_974257.1)

Subcellular
localization
TargetP

scret 8	(predict for NP_187480.1)
scret 8	(predict for NP_974257.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AT3G08680	ath-u.5 for AT3G08680	ath-r.7 for AT3G08680	ath-e.2 for AT3G08680	ath-m.4.bio for AT3G08680	ath-m.4.hor for AT3G08680	ath-m.4.lig for AT3G08680	ath-m.4.str for AT3G08680	ath-m.4.tis for AT3G08680	ath-u.5 for AT5G58300	bra-r.6 for 103870602	bra-r.6 for 103848802	bna-r.1 for 106435691	bna-r.1 for 106387560	bna-r.1 for 106387165	ghi-r.1 for 107910652	ghi-r.1 for 107896844	ghi-r.1 for 107887318	cit-r.1 for 102613089	cit-r.1 for 102627189	cit-r.1 for 102622990	gma-u.5 for 100776232	gma-u.5 for 100786831	gma-u.5 for 100786974	vvi-u.5 for 100255050	vvi-u.5 for 100241663	ppo-u.5 for 18108350	ppo-u.5 for 7494654	mtr-u.5 for 11435321	mtr-u.5 for 25489807	mtr-u.5 for 11440175	sly-u.5 for 101263638	sly-u.5 for 101252259	sly-u.5 for 101268878	sot-r.1 for 102594475	sot-r.1 for 102587960	nta-r.1 for 107802339	nta-r.1 for 107761564	nta-r.1 for 107770175	osa-u.5 for 4327447	osa-u.5 for 4339119	zma-u.5 for 100191484	zma-u.5 for 100381972	zma-u.5 for 103630495	tae-r.2 for 123079568	tae-r.2 for 123060142	tae-r.2 for 123062429	hvu-r.1 for 123444714	hvu-r.1 for 123444618	sbi-r.1 for 8055303	sbi-r.1 for 8077010	bdi-r.1 for 100838882	bdi-r.1 for 100821199

Ortholog

Ortholog ID: 1501

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

Leucine-rich repeat protein kinase family protein

probable inactive receptor kinase At3g08680

probable inactive receptor kinase At5g58300

probable inactive receptor kinase At3g08680

probable inactive receptor kinase At5g58300

putative inactive receptor kinase At5g58300

probable inactive receptor kinase At5g58300

putative leucine-rich repeat receptor-like protein kinase family protein

probable inactive receptor kinase At5g58300

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00380	Tryptophan metabolism	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00561	Glycerolipid metabolism	2
cit00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	2
cit01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00944	Flavone and flavonol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00053	Ascorbate and aldarate metabolism	2
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot01240	Biosynthesis of cofactors	2
sot01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta02010	ABC transporters	2
nta04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	4
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
nta01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00061	Fatty acid biosynthesis	2
osa00780	Biotin metabolism	2
osa01212	Fatty acid metabolism	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	9
zma04145	Phagosome	8
zma04517	IgSF CAM signaling	8
zma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	5
zma04145	Phagosome	2
zma04517	IgSF CAM signaling	2
zma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	2
tae00541	Biosynthesis of various nucleotide sugars	2
tae01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	7
tae01250	Biosynthesis of nucleotide sugars	7
tae00380	Tryptophan metabolism	3
tae04075	Plant hormone signal transduction	3
tae00040	Pentose and glucuronate interconversions	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	4
tae01250	Biosynthesis of nucleotide sugars	4
tae00380	Tryptophan metabolism	3
tae04075	Plant hormone signal transduction	3
tae00040	Pentose and glucuronate interconversions	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00970	Aminoacyl-tRNA biosynthesis	3
bdi00190	Oxidative phosphorylation	2
bdi03010	Ribosome	2

Expression

Expression pattern

Entrez Gene ID^*

820015

835942

103848802

103851647

106387560

106388240

106452839

107896844

107914509

107962382

102613089

102627189

102622990

100796171

100796675

100818444

100255050

100241663

18108350

7464742

11435321

25489807

11440175

101263638

101268878

102587960

102579114

107827482

107820573

107815429

4327447

4339119

100191484

100381972

103630495

123079568

123137092

123182375

123444714

123444618

8055303

8077010

100838882

100821199

The preparation time of this page was 0.3 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	10	2	3	3	3	3	2	2	3	3	2	3	2	3	3	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT3G08680 (ath-m.9 coexpression data)

Top 50 enrichment test to AT3G08680 (ath-m.9 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**