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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G09720   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   AT3G09720   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-r.7   AT3G09720   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-e.2   AT3G09720   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.bio   AT3G09720   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.hor   AT3G09720   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.lig   AT3G09720   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.str   AT3G09720   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.tis   AT3G09720   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 bra-r.6   103847980   DEAD-box ATP-dependent RNA helicase 57 
 bna-r.1   106427949   DEAD-box ATP-dependent RNA helicase 57 
 bna-r.1   125585595   DEAD-box ATP-dependent RNA helicase 57-like 
 ghi-r.1   121209546   DEAD-box ATP-dependent RNA helicase 57 
 ghi-r.1   107898812   DEAD-box ATP-dependent RNA helicase 57 
 cit-r.1   102615333   DEAD-box ATP-dependent RNA helicase 57 
 gma-u.5   100800969   DEAD-box ATP-dependent RNA helicase 57 
 gma-u.5   100778285   DEAD-box ATP-dependent RNA helicase 57 
 vvi-u.5   100267132   DEAD-box ATP-dependent RNA helicase 57 
 ppo-u.5   18108379   DEAD-box ATP-dependent RNA helicase 57 
 mtr-u.5   11421484   DEAD-box ATP-dependent RNA helicase 57 
 sly-u.5   101253617   DEAD-box ATP-dependent RNA helicase 57 
 sot-r.1   102586674   DEAD-box ATP-dependent RNA helicase 57 
 nta-r.1   107762477   DEAD-box ATP-dependent RNA helicase 57 
 osa-u.5   4344113   DEAD-box ATP-dependent RNA helicase 57-like 
 zma-u.5   103647899   DEAD-box ATP-dependent RNA helicase 57 
 zma-u.5   100383059   uncharacterized LOC100383059 
 tae-r.2   123187710   DEAD-box ATP-dependent RNA helicase 57 
 tae-r.2   123051812   DEAD-box ATP-dependent RNA helicase 57 
 tae-r.2   123043940   DEAD-box ATP-dependent RNA helicase 57 
 hvu-r.1   123424999   DEAD-box ATP-dependent RNA helicase 57 
 sbi-r.1   8072221   DEAD-box ATP-dependent RNA helicase 57 
 bdi-r.1   100835502   DEAD-box ATP-dependent RNA helicase 57 
 cre-r.1   CHLRE_05g238900v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G09720 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G09720 (ath-m.9 coexpression data)

CoexMap"820129"


athAT3G09720 | Entrez gene ID : 820129      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 1 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030490 [list] [network] maturation of SSU-rRNA  (4 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (42 genes)  IEA  
Protein NP_001326599.1 [sequence] [blastp]
NP_187583.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cyto 1  (predict for NP_001326599.1)
nucl 9,  chlo 1,  cyto 1  (predict for NP_187583.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001326599.1)
other 8  (predict for NP_187583.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G09720
ath-u.5
for
AT3G09720
ath-r.7
for
AT3G09720
ath-e.2
for
AT3G09720
ath-m.4.bio
for
AT3G09720
ath-m.4.hor
for
AT3G09720
ath-m.4.lig
for
AT3G09720
ath-m.4.str
for
AT3G09720
ath-m.4.tis
for
AT3G09720
bra-r.6
for
103847980
bna-r.1
for
106427949
bna-r.1
for
125585595
ghi-r.1
for
121209546
ghi-r.1
for
107898812
cit-r.1
for
102615333
gma-u.5
for
100800969
gma-u.5
for
100778285
vvi-u.5
for
100267132
ppo-u.5
for
18108379
mtr-u.5
for
11421484
sly-u.5
for
101253617
sot-r.1
for
102586674
nta-r.1
for
107762477
osa-u.5
for
4344113
zma-u.5
for
103647899
zma-u.5
for
100383059
tae-r.2
for
123187710
tae-r.2
for
123051812
tae-r.2
for
123043940
hvu-r.1
for
123424999
sbi-r.1
for
8072221
bdi-r.1
for
100835502
cre-r.1
for
CHLRE_05g238900v5


Ortholog ID: 9463
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta osa zma zma tae tae hvu sbi bdi cre
Symbol AT3G09720 LOC103847980 LOC106427949 LOC125585595 LOC121209546 LOC107898812 LOC102615333 LOC100800969 LOC100778285 LOC100267132 LOC18108379 LOC11421484 LOC101253617 LOC102586674 LOC107762477 LOC4344113 LOC103647899 LOC100383059 LOC123051812 LOC123043940 LOC123424999 LOC8072221 LOC100835502 CHLRE_05g238900v5
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein DEAD-box ATP-dependent RNA helicase 57 DEAD-box ATP-dependent RNA helicase 57 DEAD-box ATP-dependent RNA helicase 57-like DEAD-box ATP-dependent RNA helicase 57 DEAD-box ATP-dependent RNA helicase 57 DEAD-box ATP-dependent RNA helicase 57 DEAD-box ATP-dependent RNA helicase 57 DEAD-box ATP-dependent RNA helicase 57 DEAD-box ATP-dependent RNA helicase 57 DEAD-box ATP-dependent RNA helicase 57 DEAD-box ATP-dependent RNA helicase 57 DEAD-box ATP-dependent RNA helicase 57 DEAD-box ATP-dependent RNA helicase 57 DEAD-box ATP-dependent RNA helicase 57 DEAD-box ATP-dependent RNA helicase 57-like DEAD-box ATP-dependent RNA helicase 57 uncharacterized LOC100383059 DEAD-box ATP-dependent RNA helicase 57 DEAD-box ATP-dependent RNA helicase 57 DEAD-box ATP-dependent RNA helicase 57 DEAD-box ATP-dependent RNA helicase 57 DEAD-box ATP-dependent RNA helicase 57 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
bra03020 RNA polymerase 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820129 103847980 106427949 125585595 121209546 107898812 102615333 100800969 100778285 100267132 18108379 11421484 101253617 102586674 107762477 4344113 103647899 100383059 123051812 123043940 123424999 8072221 100835502 5723276
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