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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G11880   transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane) 
 ath-u.5   AT3G11880   transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane) 
 ath-r.7   AT3G11880   transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane) 
 ath-e.2   AT3G11880   transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane) 
 ath-m.4.bio   AT3G11880   transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane) 
 ath-m.4.hor   AT3G11880   transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane) 
 ath-m.4.lig   AT3G11880   transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane) 
 ath-m.4.str   AT3G11880   transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane) 
 ath-m.4.tis   AT3G11880   transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane) 
 ath-u.5   AT1G23170   transmembrane protein (Protein of unknown function DUF2359, transmembrane) 
 ath-u.5   AT1G70770   transmembrane protein (Protein of unknown function DUF2359, transmembrane) 
 bra-r.6   103829284   uncharacterized LOC103829284 
 bra-r.6   103840791   uncharacterized LOC103840791 
 bra-r.6   103831611   transmembrane protein 214 
 bna-r.1   106405915   transmembrane protein 214 
 bna-r.1   106358137   uncharacterized LOC106358137 
 bna-r.1   106395151   transmembrane protein 214-like 
 ghi-r.1   121215998   transmembrane protein 214 
 ghi-r.1   121213667   uncharacterized LOC121213667 
 ghi-r.1   107939105   uncharacterized LOC107939105 
 cit-r.1   102617537   hypothetical protein 
 cit-r.1   102617976   uncharacterized LOC102617976 
 gma-u.5   100805286   transmembrane protein 214 
 gma-u.5   100795409   uncharacterized LOC100795409 
 gma-u.5   100795617   transmembrane protein 214-A 
 vvi-u.5   100853921   uncharacterized LOC100853921 
 vvi-u.5   100264607   uncharacterized LOC100264607 
 ppo-u.5   7475520   uncharacterized LOC7475520 
 ppo-u.5   7493538   uncharacterized LOC7493538 
 ppo-u.5   18099394   uncharacterized LOC18099394 
 mtr-u.5   120577716   transmembrane protein 214-A 
 sly-u.5   101267991   uncharacterized LOC101267991 
 sly-u.5   101258515   uncharacterized LOC101258515 
 sot-r.1   102600519   uncharacterized LOC102600519 
 sot-r.1   102586576   uncharacterized LOC102586576 
 nta-r.1   107816712   uncharacterized LOC107816712 
 nta-r.1   107791788   uncharacterized LOC107791788 
 nta-r.1   142167941   uncharacterized LOC142167941 
 osa-u.5   4325966   uncharacterized LOC4325966 
 zma-u.5   100382048   uncharacterized LOC100382048 
 zma-u.5   103634783   transmembrane protein 214-A 
 tae-r.2   123059956   uncharacterized LOC123059956 
 tae-r.2   123076892   uncharacterized LOC123076892 
 tae-r.2   123068343   uncharacterized LOC123068343 
 hvu-r.1   123442442   uncharacterized LOC123442442 
 hvu-r.1   123408927   uncharacterized LOC123408927 
 sbi-r.1   8073361   uncharacterized LOC8073361 
 bdi-r.1   100843652   uncharacterized LOC100843652 

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Top 50 coexpressed genes to AT3G11880 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G11880 (ath-m.9 coexpression data)

CoexMap"820361"


athAT3G11880 | Entrez gene ID : 820361      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 11 3 3 3 2 3 2 3 1 2 2 3 1 2 3 2 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001327742.1 [sequence] [blastp]
NP_001327743.1 [sequence] [blastp]
NP_001327744.1 [sequence] [blastp]
NP_566403.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 4,  chlo 2,  mito 2,  chlo_mito 2,  E.R._plas 2,  cyto_E.R. 2  (predict for NP_001327742.1)
plas 3,  nucl 2,  cyto 2,  cyto_nucl 2,  E.R._plas 2  (predict for NP_001327743.1)
chlo 3,  E.R. 2,  chlo_mito 2,  nucl 1,  mito 1,  E.R._plas 1,  cyto_E.R. 1  (predict for NP_001327744.1)
cyto 4,  vacu 3,  plas 2,  cyto_nucl 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_566403.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001327742.1)
other 8  (predict for NP_001327743.1)
other 8  (predict for NP_001327744.1)
other 8  (predict for NP_566403.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G11880
ath-u.5
for
AT3G11880
ath-r.7
for
AT3G11880
ath-e.2
for
AT3G11880
ath-m.4.bio
for
AT3G11880
ath-m.4.hor
for
AT3G11880
ath-m.4.lig
for
AT3G11880
ath-m.4.str
for
AT3G11880
ath-m.4.tis
for
AT3G11880
ath-u.5
for
AT1G23170
ath-u.5
for
AT1G70770
bra-r.6
for
103829284
bra-r.6
for
103840791
bra-r.6
for
103831611
bna-r.1
for
106405915
bna-r.1
for
106358137
bna-r.1
for
106395151
ghi-r.1
for
121215998
ghi-r.1
for
121213667
ghi-r.1
for
107939105
cit-r.1
for
102617537
cit-r.1
for
102617976
gma-u.5
for
100805286
gma-u.5
for
100795409
gma-u.5
for
100795617
vvi-u.5
for
100853921
vvi-u.5
for
100264607
ppo-u.5
for
7475520
ppo-u.5
for
7493538
ppo-u.5
for
18099394
mtr-u.5
for
120577716
sly-u.5
for
101267991
sly-u.5
for
101258515
sot-r.1
for
102600519
sot-r.1
for
102586576
nta-r.1
for
107816712
nta-r.1
for
107791788
nta-r.1
for
142167941
osa-u.5
for
4325966
zma-u.5
for
100382048
zma-u.5
for
103634783
tae-r.2
for
123059956
tae-r.2
for
123076892
tae-r.2
for
123068343
hvu-r.1
for
123442442
hvu-r.1
for
123408927
sbi-r.1
for
8073361
bdi-r.1
for
100843652


Ortholog ID: 3546
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu hvu sbi bdi
Symbol AT3G11880 AT1G23170 AT1G70770 LOC103829284 LOC103840791 LOC103831611 LOC106405915 LOC106395151 BNAA09G30070D LOC121213667 LOC107939105 LOC107910825 LOC102617537 LOC102617976 LOC100805286 LOC100795409 LOC100777797 LOC100853921 LOC100264607 LOC7475520 LOC7493538 LOC18099394 LOC120577716 LOC101267991 LOC101258515 LOC102600519 LOC102586576 LOC107816712 LOC107791788 LOC142167941 LOC4325966 LOC100382048 LOC103634783 LOC123059956 LOC123076892 LOC123068343 LOC123442442 LOC123408927 LOC8073361 LOC100843652
Function* transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane) transmembrane protein (Protein of unknown function DUF2359, transmembrane) transmembrane protein (Protein of unknown function DUF2359, transmembrane) uncharacterized LOC103829284 uncharacterized LOC103840791 transmembrane protein 214 transmembrane protein 214 transmembrane protein 214-like uncharacterized BNAA09G30070D uncharacterized LOC121213667 uncharacterized LOC107939105 uncharacterized LOC107910825 hypothetical protein uncharacterized LOC102617976 transmembrane protein 214 uncharacterized LOC100795409 uncharacterized LOC100777797 uncharacterized LOC100853921 uncharacterized LOC100264607 uncharacterized LOC7475520 uncharacterized LOC7493538 uncharacterized LOC18099394 transmembrane protein 214-A uncharacterized LOC101267991 uncharacterized LOC101258515 uncharacterized LOC102600519 uncharacterized LOC102586576 uncharacterized LOC107816712 uncharacterized LOC107791788 uncharacterized LOC142167941 uncharacterized LOC4325966 uncharacterized LOC100382048 transmembrane protein 214-A uncharacterized LOC123059956 uncharacterized LOC123076892 uncharacterized LOC123068343 uncharacterized LOC123442442 uncharacterized LOC123408927 uncharacterized LOC8073361 uncharacterized LOC100843652
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00541 Biosynthesis of various nucleotide sugars 2
ath01240 Biosynthesis of cofactors 2
ath01250 Biosynthesis of nucleotide sugars 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 2
ath04144 Endocytosis 2
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 3
bra04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 6
bra00510 N-Glycan biosynthesis 3
bra00513 Various types of N-glycan biosynthesis 3
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 4
bna00053 Ascorbate and aldarate metabolism 4
bna00520 Amino sugar and nucleotide sugar metabolism 4
bna00541 Biosynthesis of various nucleotide sugars 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00541 Biosynthesis of various nucleotide sugars 4
ghi01250 Biosynthesis of nucleotide sugars 4
ghi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00541 Biosynthesis of various nucleotide sugars 7
ghi01250 Biosynthesis of nucleotide sugars 7
ghi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 8
ghi04814 Motor proteins 4
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 13
gma03060 Protein export 8
gma04145 Phagosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 13
gma03060 Protein export 5
gma04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00290 Valine, leucine and isoleucine biosynthesis 5
ppo01230 Biosynthesis of amino acids 5
ppo00770 Pantothenate and CoA biosynthesis 4
ppo01210 2-Oxocarboxylic acid metabolism 4
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 11
mtr03060 Protein export 4
mtr04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00020 Citrate cycle (TCA cycle) 5
sly01200 Carbon metabolism 5
sly00640 Propanoate metabolism 3
sly00785 Lipoic acid metabolism 3
sly01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 12
sly04145 Phagosome 3
sly03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 5
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04130 SNARE interactions in vesicular transport 3
sot04145 Phagosome 3
sot03060 Protein export 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
nta00051 Fructose and mannose metabolism 2
nta00500 Starch and sucrose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 10
osa03060 Protein export 6
osa04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 3
zma04145 Phagosome 3
zma04141 Protein processing in endoplasmic reticulum 3
zma01200 Carbon metabolism 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma01200 Carbon metabolism 2
zma03060 Protein export 2
zma04141 Protein processing in endoplasmic reticulum 2
zma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae01200 Carbon metabolism 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae01200 Carbon metabolism 3
tae03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 11
hvu04145 Phagosome 5
hvu03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00051 Fructose and mannose metabolism 2
sbi00500 Starch and sucrose metabolism 2
sbi00520 Amino sugar and nucleotide sugar metabolism 2
sbi01250 Biosynthesis of nucleotide sugars 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 8
bdi00510 N-Glycan biosynthesis 4
bdi00513 Various types of N-glycan biosynthesis 4
bdi04145 Phagosome 3
bdi03060 Protein export 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820361 838925 843414 103829284 103840791 103831611 106405915 106395151 106440983 121213667 107939105 107910825 102617537 102617976 100805286 100795409 100777797 100853921 100264607 7475520 7493538 18099394 120577716 101267991 101258515 102600519 102586576 107816712 107791788 142167941 4325966 100382048 103634783 123059956 123076892 123068343 123442442 123408927 8073361 100843652
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