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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G12040   DNA-3-methyladenine glycosylase (MAG) 
 ath-u.5   AT3G12040   DNA-3-methyladenine glycosylase (MAG) 
 ath-r.7   AT3G12040   DNA-3-methyladenine glycosylase (MAG) 
 ath-e.2   AT3G12040   DNA-3-methyladenine glycosylase (MAG) 
 ath-m.4.bio   AT3G12040   DNA-3-methyladenine glycosylase (MAG) 
 ath-m.4.hor   AT3G12040   DNA-3-methyladenine glycosylase (MAG) 
 ath-m.4.lig   AT3G12040   DNA-3-methyladenine glycosylase (MAG) 
 ath-m.4.str   AT3G12040   DNA-3-methyladenine glycosylase (MAG) 
 ath-m.4.tis   AT3G12040   DNA-3-methyladenine glycosylase (MAG) 
 bra-r.6   103870283   DNA-3-methyladenine glycosylase 
 bna-r.1   106345510   DNA-3-methyladenine glycosylase 
 ghi-r.1   107899396   DNA-3-methyladenine glycosylase 
 ghi-r.1   107948576   DNA-3-methyladenine glycosylase 
 cit-r.1   102620793   DNA-3-methyladenine glycosylase 
 gma-u.5   100813424   DNA-3-methyladenine glycosylase 
 vvi-u.5   100250307   DNA-3-methyladenine glycosylase 
 ppo-u.5   7484030   DNA-3-methyladenine glycosylase 
 mtr-u.5   11446465   DNA-3-methyladenine glycosylase 
 sly-u.5   101264772   DNA-3-methyladenine glycosylase 
 sot-r.1   102599279   DNA-3-methyladenine glycosylase 
 nta-r.1   107791102   DNA-3-methyladenine glycosylase 
 nta-r.1   107759159   DNA-3-methyladenine glycosylase 
 zma-u.5   100285435   DNA-3-methyladenine glycosylase 
 hvu-r.1   123403993   DNA-3-methyladenine glycosylase 
 bdi-r.1   100822861   DNA-3-methyladenine glycosylase 

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Top 50 coexpressed genes to AT3G12040 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G12040 (ath-m.9 coexpression data)

CoexMap"820378"


athAT3G12040 | Entrez gene ID : 820378      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta zma hvu bdi tae sbi cre osa
Paralog 9 1 1 2 1 1 1 1 1 1 1 2 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03410 [list] [network] Base excision repair (50 genes)
GO BP
GO:0006284 [list] [network] base-excision repair  (21 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0008725 [list] [network] DNA-3-methyladenine glycosylase activity  (8 genes)  IGI  
Protein NP_001326241.1 [sequence] [blastp]
NP_187811.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  cyto 1,  mito 1  (predict for NP_001326241.1)
chlo 4,  mito 3,  cyto 2,  nucl 1,  cyto_mito 1,  mito_plas 1  (predict for NP_187811.1)
Subcellular
localization
TargetP
other 3,  mito 3,  chlo 3  (predict for NP_001326241.1)
other 3,  mito 3,  chlo 3  (predict for NP_187811.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G12040
ath-u.5
for
AT3G12040
ath-r.7
for
AT3G12040
ath-e.2
for
AT3G12040
ath-m.4.bio
for
AT3G12040
ath-m.4.hor
for
AT3G12040
ath-m.4.lig
for
AT3G12040
ath-m.4.str
for
AT3G12040
ath-m.4.tis
for
AT3G12040
bra-r.6
for
103870283
bna-r.1
for
106345510
ghi-r.1
for
107899396
ghi-r.1
for
107948576
cit-r.1
for
102620793
gma-u.5
for
100813424
vvi-u.5
for
100250307
ppo-u.5
for
7484030
mtr-u.5
for
11446465
sly-u.5
for
101264772
sot-r.1
for
102599279
nta-r.1
for
107791102
nta-r.1
for
107759159
zma-u.5
for
100285435
hvu-r.1
for
123403993
bdi-r.1
for
100822861


Ortholog ID: 11674
Species ath bra bna ghi ghi cit gma vvi ppo mtr sly sot nta nta zma hvu bdi
Symbol AT3G12040 LOC103870283 LOC106345510 LOC107899396 LOC107948576 LOC102620793 LOC100813424 LOC100250307 LOC7484030 LOC11446465 LOC101264772 LOC102599279 LOC107791102 LOC107759159 LOC100285435 LOC123403993 LOC100822861
Function* DNA-3-methyladenine glycosylase (MAG) DNA-3-methyladenine glycosylase DNA-3-methyladenine glycosylase DNA-3-methyladenine glycosylase DNA-3-methyladenine glycosylase DNA-3-methyladenine glycosylase DNA-3-methyladenine glycosylase DNA-3-methyladenine glycosylase DNA-3-methyladenine glycosylase DNA-3-methyladenine glycosylase DNA-3-methyladenine glycosylase DNA-3-methyladenine glycosylase DNA-3-methyladenine glycosylase DNA-3-methyladenine glycosylase DNA-3-methyladenine glycosylase DNA-3-methyladenine glycosylase DNA-3-methyladenine glycosylase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 4
ath04075 Plant hormone signal transduction 2
ath00564 Glycerophospholipid metabolism 2
ath00565 Ether lipid metabolism 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
bna00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 3
cit03018 RNA degradation 2
cit04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 2
bdi00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820378 103870283 106345510 107899396 107948576 102620793 100813424 100250307 7484030 11446465 101264772 102599279 107791102 107759159 100285435 123403993 100822861
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