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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   FAD2   fatty acid desaturase 2 
 ath-u.5   FAD2   fatty acid desaturase 2 
 ath-r.7   FAD2   fatty acid desaturase 2 
 ath-e.2   FAD2   fatty acid desaturase 2 
 ath-m.4.bio   FAD2   fatty acid desaturase 2 
 ath-m.4.hor   FAD2   fatty acid desaturase 2 
 ath-m.4.lig   FAD2   fatty acid desaturase 2 
 ath-m.4.str   FAD2   fatty acid desaturase 2 
 ath-m.4.tis   FAD2   fatty acid desaturase 2 
 bra-r.6   103870276   omega-6 fatty acid desaturase, endoplasmic reticulum 
 bna-r.1   106452523   omega-6 fatty acid desaturase, endoplasmic reticulum 
 bna-r.1   106417584   omega-6 fatty acid desaturase, endoplasmic reticulum-like 
 ghi-r.1   107945411   delta(12)-fatty-acid desaturase FAD2 
 ghi-r.1   121212649   delta(12)-acyl-lipid-desaturase 
 ghi-r.1   107941903   delta(12)-fatty-acid desaturase FAD2 
 cit-r.1   102611163   delta(12)-fatty-acid desaturase FAD2 
 cit-r.1   102627239   delta(12)-fatty-acid desaturase FAD2 
 gma-u.5   FAD2-1B   omega-6 fatty acid desaturase 
 gma-u.5   FAD2-2D   fatty acid desaturase-2 
 gma-u.5   FAD2-2B   fatty acid desaturase-2 
 vvi-u.5   100252129   delta(12)-fatty-acid desaturase FAD2 
 vvi-u.5   100258789   omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2-like 
 ppo-u.5   7479530   delta(12)-fatty-acid desaturase FAD2 
 mtr-u.5   25483518   delta(12)-fatty-acid desaturase FAD2 
 mtr-u.5   11444765   omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 
 sly-u.5   101250481   delta(12)-fatty-acid desaturase 
 sly-u.5   SlFAD2-7   delta(12)-fatty-acid desaturase 
 sly-u.5   101259966   delta(12)-fatty-acid desaturase 
 sot-r.1   102579844   delta(12) oleic acid desaturase FAD2-like 
 sot-r.1   102593159   delta(12)-acyl-lipid-desaturase-like 
 sot-r.1   102600240   delta(12) oleic acid desaturase FAD2-like 
 nta-r.1   107829678   delta(12)-fatty-acid desaturase FAD2-like 
 nta-r.1   107773163   delta(12)-fatty-acid desaturase FAD2-like 
 nta-r.1   107814090   delta(12)-fatty-acid desaturase FAD2 
 osa-u.5   4330523   fatty acid desaturase DES2 
 osa-u.5   4343026   fatty acid desaturase DES2 
 osa-u.5   4343027   fatty acid desaturase DES2 
 zma-u.5   100381639   Delta(12)-fatty-acid desaturase 
 zma-u.5   100282744   omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 
 zma-u.5   100273207   Delta(12)-fatty-acid desaturase 
 tae-r.2   123138008   fatty acid desaturase DES2 
 tae-r.2   123134421   fatty acid desaturase DES2-like 
 hvu-r.1   123405501   fatty acid desaturase DES2 
 sbi-r.1   110435045   fatty acid desaturase DES2 
 sbi-r.1   8066368   fatty acid desaturase DES2 
 bdi-r.1   100835723   fatty acid desaturase DES2 
 bdi-r.1   100837786   fatty acid desaturase DES2 
 cre-r.1   CHLRE_17g711150v5   uncharacterized protein 

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Top 50 coexpressed genes to FAD2 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to FAD2 (ath-m.9 coexpression data)

CoexMap"820387"


athFAD2 | Entrez gene ID : 820387      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 3 2 3 2 1 2 3 3 3 3 3 2 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath01040 [list] [network] Biosynthesis of unsaturated fatty acids (25 genes)
ath01212 [list] [network] Fatty acid metabolism (70 genes)
GO BP
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (897 genes)  NAS  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0016720 [list] [network] acyl-lipid Delta(12)-acetylenase  (1 genes)  IGI  
GO:0050184 [list] [network] acyl-lipid omega-6 desaturase (cytochrome b5) activity  (1 genes)  IEA  
GO:0102985 [list] [network] acyl-CoA (9+3)-desaturase activity  (1 genes)  IEA  
GO:0045485 [list] [network] omega-6 fatty acid desaturase activity  (2 genes)  IDA  
Protein NP_001319529.1 [sequence] [blastp]
NP_187819.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  E.R. 3,  mito 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001319529.1)
chlo 4,  E.R. 3,  mito 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_187819.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001319529.1)
other 7  (predict for NP_187819.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
FAD2
ath-u.5
for
FAD2
ath-r.7
for
FAD2
ath-e.2
for
FAD2
ath-m.4.bio
for
FAD2
ath-m.4.hor
for
FAD2
ath-m.4.lig
for
FAD2
ath-m.4.str
for
FAD2
ath-m.4.tis
for
FAD2
bra-r.6
for
103870276
bna-r.1
for
106452523
bna-r.1
for
106417584
ghi-r.1
for
107945411
ghi-r.1
for
121212649
ghi-r.1
for
107941903
cit-r.1
for
102611163
cit-r.1
for
102627239
gma-u.5
for
FAD2-1B
gma-u.5
for
FAD2-2D
gma-u.5
for
FAD2-2B
vvi-u.5
for
100252129
vvi-u.5
for
100258789
ppo-u.5
for
7479530
mtr-u.5
for
25483518
mtr-u.5
for
11444765
sly-u.5
for
101250481
sly-u.5
for
SlFAD2-7
sly-u.5
for
101259966
sot-r.1
for
102579844
sot-r.1
for
102593159
sot-r.1
for
102600240
nta-r.1
for
107829678
nta-r.1
for
107773163
nta-r.1
for
107814090
osa-u.5
for
4330523
osa-u.5
for
4343026
osa-u.5
for
4343027
zma-u.5
for
100381639
zma-u.5
for
100282744
zma-u.5
for
100273207
tae-r.2
for
123138008
tae-r.2
for
123134421
hvu-r.1
for
123405501
sbi-r.1
for
110435045
sbi-r.1
for
8066368
bdi-r.1
for
100835723
bdi-r.1
for
100837786
cre-r.1
for
CHLRE_17g711150v5


Ortholog ID: 1460
Species ath bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae hvu sbi sbi bdi bdi cre
Symbol FAD2 LOC103870276 LOC106452523 LOC106417584 LOC106452409 LOC107941903 LOC107934594 LOC107921152 LOC102611163 LOC102627239 FAD2-1B FAD2-2D FAD2-2B LOC100252129 LOC100258789 LOC7483273 LOC7483979 LOC25483518 LOC11444765 LOC101250481 SlFAD2-7 cevi19 LOC102600240 LOC102596973 LOC102579518 LOC107829678 LOC107814090 LOC107831844 LOC4330523 LOC4343026 LOC4343027 LOC100273207 LOC118475586 LOC103640919 LOC123145293 LOC123145289 LOC123405501 LOC110435045 LOC8066368 LOC100835723 LOC100837786 CHLRE_17g711150v5
Function* fatty acid desaturase 2 omega-6 fatty acid desaturase, endoplasmic reticulum omega-6 fatty acid desaturase, endoplasmic reticulum omega-6 fatty acid desaturase, endoplasmic reticulum-like omega-6 fatty acid desaturase, endoplasmic reticulum delta(12)-fatty-acid desaturase FAD2 delta(12)-fatty-acid desaturase FAD2-like delta(12)-fatty-acid desaturase FAD2-like delta(12)-fatty-acid desaturase FAD2 delta(12)-fatty-acid desaturase FAD2 omega-6 fatty acid desaturase fatty acid desaturase-2 fatty acid desaturase-2 delta(12)-fatty-acid desaturase FAD2 omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2-like delta(12)-acyl-lipid-desaturase delta(12)-fatty-acid desaturase FAD2 delta(12)-fatty-acid desaturase FAD2 omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 delta(12)-fatty-acid desaturase delta(12)-fatty-acid desaturase delta(12)-fatty-acid desaturase delta(12) oleic acid desaturase FAD2-like delta(12) oleic acid desaturase FAD2-like delta(12) oleic acid desaturase FAD2-like delta(12)-fatty-acid desaturase FAD2-like delta(12)-fatty-acid desaturase FAD2 delta(12)-acyl-lipid-desaturase fatty acid desaturase DES2 fatty acid desaturase DES2 fatty acid desaturase DES2 Delta(12)-fatty-acid desaturase fatty acid desaturase DES2-like fatty acid desaturase DES2 fatty acid desaturase DES2 fatty acid desaturase DES2-like fatty acid desaturase DES2 fatty acid desaturase DES2 fatty acid desaturase DES2 fatty acid desaturase DES2 fatty acid desaturase DES2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
ath03083 Polycomb repressive complex 2
ath04120 Ubiquitin mediated proteolysis 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01040 Biosynthesis of unsaturated fatty acids 3
bna01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01040 Biosynthesis of unsaturated fatty acids 3
bna01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01040 Biosynthesis of unsaturated fatty acids 3
bna01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01040 Biosynthesis of unsaturated fatty acids 4
ghi01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01040 Biosynthesis of unsaturated fatty acids 2
ghi01212 Fatty acid metabolism 2
ghi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01040 Biosynthesis of unsaturated fatty acids 4
ghi01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 7
cit00360 Phenylalanine metabolism 3
cit00941 Flavonoid biosynthesis 3
cit00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
cit00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01040 Biosynthesis of unsaturated fatty acids 2
gma01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 4
gma01310 Nitrogen cycle 4
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00100 Steroid biosynthesis 4
gma01040 Biosynthesis of unsaturated fatty acids 4
gma01212 Fatty acid metabolism 4
gma04082 Neuroactive ligand signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01040 Biosynthesis of unsaturated fatty acids 2
vvi01212 Fatty acid metabolism 2
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00073 Cutin, suberine and wax biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01040 Biosynthesis of unsaturated fatty acids 4
sly01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01040 Biosynthesis of unsaturated fatty acids 4
sly01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01212 Fatty acid metabolism 13
sot01040 Biosynthesis of unsaturated fatty acids 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01212 Fatty acid metabolism 13
sot01040 Biosynthesis of unsaturated fatty acids 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01040 Biosynthesis of unsaturated fatty acids 9
sot01212 Fatty acid metabolism 9
sot00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 4
nta00541 Biosynthesis of various nucleotide sugars 3
nta01040 Biosynthesis of unsaturated fatty acids 2
nta01212 Fatty acid metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 7
nta01040 Biosynthesis of unsaturated fatty acids 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta00360 Phenylalanine metabolism 3
nta01040 Biosynthesis of unsaturated fatty acids 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00900 Terpenoid backbone biosynthesis 3
osa01040 Biosynthesis of unsaturated fatty acids 2
osa01212 Fatty acid metabolism 2
osa00230 Purine metabolism 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00904 Diterpenoid biosynthesis 10
osa01040 Biosynthesis of unsaturated fatty acids 2
osa01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00904 Diterpenoid biosynthesis 10
osa01040 Biosynthesis of unsaturated fatty acids 2
osa01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00909 Sesquiterpenoid and triterpenoid biosynthesis 3
zma01040 Biosynthesis of unsaturated fatty acids 2
zma01212 Fatty acid metabolism 2
zma00280 Valine, leucine and isoleucine degradation 2
zma00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01212 Fatty acid metabolism 5
zma01040 Biosynthesis of unsaturated fatty acids 4
zma00280 Valine, leucine and isoleucine degradation 2
zma00650 Butanoate metabolism 2
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00909 Sesquiterpenoid and triterpenoid biosynthesis 3
zma01040 Biosynthesis of unsaturated fatty acids 2
zma01212 Fatty acid metabolism 2
zma00280 Valine, leucine and isoleucine degradation 2
zma00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00600 Sphingolipid metabolism 5
tae01040 Biosynthesis of unsaturated fatty acids 3
tae01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01040 Biosynthesis of unsaturated fatty acids 6
tae01212 Fatty acid metabolism 6
tae00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00710 Carbon fixation by Calvin cycle 5
sbi01200 Carbon metabolism 5
sbi00030 Pentose phosphate pathway 4
sbi01230 Biosynthesis of amino acids 4
sbi00360 Phenylalanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00360 Phenylalanine metabolism 8
sbi00940 Phenylpropanoid biosynthesis 8
sbi01230 Biosynthesis of amino acids 3
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sbi01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 4
bdi01040 Biosynthesis of unsaturated fatty acids 2
bdi01212 Fatty acid metabolism 2
bdi00196 Photosynthesis - antenna proteins 2
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00944 Flavone and flavonol biosynthesis 2
bdi01040 Biosynthesis of unsaturated fatty acids 2
bdi01212 Fatty acid metabolism 2
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820387 103870276 106452523 106417584 106452409 107941903 107934594 107921152 102611163 102627239 100805777 100780912 100805040 100252129 100258789 7483273 7483979 25483518 11444765 101250481 101255474 544107 102600240 102596973 102579518 107829678 107814090 107831844 4330523 4343026 4343027 100273207 118475586 103640919 123145293 123145289 123405501 110435045 8066368 100835723 100837786 5717125
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