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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G12180   Cornichon family protein 
 ath-u.5   AT3G12180   Cornichon family protein 
 ath-r.7   AT3G12180   Cornichon family protein 
 ath-e.2   AT3G12180   Cornichon family protein 
 ath-m.4.bio   AT3G12180   Cornichon family protein 
 ath-m.4.hor   AT3G12180   Cornichon family protein 
 ath-m.4.lig   AT3G12180   Cornichon family protein 
 ath-m.4.str   AT3G12180   Cornichon family protein 
 ath-m.4.tis   AT3G12180   Cornichon family protein 
 ath-u.5   AT4G12090   Cornichon family protein 
 ath-u.5   AT1G12340   Cornichon family protein 
 ath-u.5   AT1G12390   Cornichon family protein 
 bra-r.6   103845723   protein cornichon homolog 1 
 bra-r.6   103853492   protein cornichon homolog 5 
 bna-r.1   106394763   protein cornichon homolog 5 
 bna-r.1   106382392   protein cornichon homolog 4-like 
 ghi-r.1   107891277   protein cornichon homolog 1 
 ghi-r.1   107963660   protein cornichon homolog 4 
 ghi-r.1   107890662   protein cornichon homolog 4 
 cit-r.1   102618579   protein cornichon homolog 1 
 cit-r.1   102627512   protein cornichon homolog 4 
 cit-r.1   102611772   protein cornichon homolog 4 
 gma-u.5   100819066   protein cornichon homolog 1 
 gma-u.5   100306019   uncharacterized LOC100306019 
 gma-u.5   100813058   probable protein cornichon homolog 2 
 vvi-u.5   100246981   protein cornichon homolog 1 
 vvi-u.5   100258514   protein cornichon homolog 4 
 ppo-u.5   18099856   protein cornichon homolog 1 
 ppo-u.5   18094416   protein cornichon homolog 4 
 mtr-u.5   25480860   protein cornichon homolog 1 
 mtr-u.5   11421655   protein cornichon homolog 1 
 mtr-u.5   11412023   protein cornichon homolog 4 
 sly-u.5   101268126   protein cornichon homolog 4-like 
 sly-u.5   101264011   protein cornichon homolog 4 
 sly-u.5   101256299   protein cornichon homolog 4 
 sot-r.1   102579679   protein cornichon homolog 4-like 
 sot-r.1   102605899   protein cornichon homolog 4-like 
 sot-r.1   102586917   protein cornichon homolog 4-like 
 nta-r.1   107831335   protein cornichon homolog 4-like 
 nta-r.1   107773748   protein cornichon homolog 4 
 nta-r.1   107778252   protein cornichon homolog 4-like 
 osa-u.5   4340041   protein cornichon homolog 4 
 osa-u.5   4352293   protein cornichon homolog 2-like 
 zma-u.5   103650597   glutathione S-transferase T3 
 zma-u.5   100282395   uncharacterized LOC100282395 
 zma-u.5   100282018   uncharacterized LOC100282018 
 tae-r.2   123087868   protein cornichon homolog 4 
 tae-r.2   123102728   protein cornichon homolog 1 
 tae-r.2   123149999   protein cornichon homolog 4 
 hvu-r.1   123409931   protein cornichon homolog 4-like 
 hvu-r.1   123395483   protein cornichon homolog 1-like 
 sbi-r.1   8064122   protein cornichon homolog 1 
 sbi-r.1   8069084   protein cornichon homolog 4 
 bdi-r.1   100834949   protein cornichon homolog 4 
 bdi-r.1   100831579   protein cornichon homolog 1 
 cre-r.1   CHLRE_01g036550v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G12180 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G12180 (ath-m.9 coexpression data)

CoexMap"820395"


athAT3G12180 | Entrez gene ID : 820395      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 12 2 2 3 3 3 2 2 3 3 3 3 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016192 [list] [network] vesicle-mediated transport  (246 genes)  IEA  
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_187825.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  vacu 3,  E.R. 2,  nucl_plas 2,  golg_plas 2,  cysk_plas 2,  mito_plas 2,  cyto_plas 2  (predict for NP_187825.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_187825.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G12180
ath-u.5
for
AT3G12180
ath-r.7
for
AT3G12180
ath-e.2
for
AT3G12180
ath-m.4.bio
for
AT3G12180
ath-m.4.hor
for
AT3G12180
ath-m.4.lig
for
AT3G12180
ath-m.4.str
for
AT3G12180
ath-m.4.tis
for
AT3G12180
ath-u.5
for
AT4G12090
ath-u.5
for
AT1G12340
ath-u.5
for
AT1G12390
bra-r.6
for
103845723
bra-r.6
for
103853492
bna-r.1
for
106394763
bna-r.1
for
106382392
ghi-r.1
for
107891277
ghi-r.1
for
107963660
ghi-r.1
for
107890662
cit-r.1
for
102618579
cit-r.1
for
102627512
cit-r.1
for
102611772
gma-u.5
for
100819066
gma-u.5
for
100306019
gma-u.5
for
100813058
vvi-u.5
for
100246981
vvi-u.5
for
100258514
ppo-u.5
for
18099856
ppo-u.5
for
18094416
mtr-u.5
for
25480860
mtr-u.5
for
11421655
mtr-u.5
for
11412023
sly-u.5
for
101268126
sly-u.5
for
101264011
sly-u.5
for
101256299
sot-r.1
for
102579679
sot-r.1
for
102605899
sot-r.1
for
102586917
nta-r.1
for
107831335
nta-r.1
for
107773748
nta-r.1
for
107778252
osa-u.5
for
4340041
osa-u.5
for
4352293
zma-u.5
for
103650597
zma-u.5
for
100282395
zma-u.5
for
100282018
tae-r.2
for
123087868
tae-r.2
for
123102728
tae-r.2
for
123149999
hvu-r.1
for
123409931
hvu-r.1
for
123395483
sbi-r.1
for
8064122
sbi-r.1
for
8069084
bdi-r.1
for
100834949
bdi-r.1
for
100831579
cre-r.1
for
CHLRE_01g036550v5


Ortholog ID: 901
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit cit gma gma vvi vvi ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol AT1G12340 AT1G12390 AT1G62880 LOC103870265 LOC103872008 LOC103836165 LOC106382392 LOC106399336 LOC106435406 LOC107891277 LOC107963660 LOC107941641 LOC102618579 LOC102627512 LOC102611772 LOC100813058 LOC100792093 LOC100246981 LOC100258514 LOC18094416 LOC7465811 LOC25480860 LOC11412023 LOC11429160 LOC101264011 LOC101256299 LOC101249895 LOC102605899 LOC102586917 LOC102600230 LOC107831335 LOC107801101 LOC107820840 LOC4340041 LOC4352293 LOC103650597 LOC100282395 LOC100282018 LOC123102728 LOC123119907 LOC123165977 LOC123409931 LOC123395483 LOC8064122 LOC8069084 LOC100834949 LOC100831579 CHLRE_01g036550v5
Function* Cornichon family protein Cornichon family protein Cornichon family protein protein cornichon homolog 1 protein cornichon homolog 4 protein cornichon homolog 4 protein cornichon homolog 4-like protein cornichon homolog 4 protein cornichon homolog 1 protein cornichon homolog 1 protein cornichon homolog 4 protein cornichon homolog 4 protein cornichon homolog 1 protein cornichon homolog 4 protein cornichon homolog 4 probable protein cornichon homolog 2 protein cornichon homolog 4 protein cornichon homolog 1 protein cornichon homolog 4 protein cornichon homolog 4 protein cornichon homolog 4 protein cornichon homolog 1 protein cornichon homolog 4 protein cornichon homolog 4 protein cornichon homolog 4 protein cornichon homolog 4 protein cornichon homolog 1 protein cornichon homolog 4-like protein cornichon homolog 4-like protein cornichon homolog 1-like protein cornichon homolog 4-like protein cornichon homolog 4-like protein cornichon homolog 1 protein cornichon homolog 4 protein cornichon homolog 2-like glutathione S-transferase T3 uncharacterized LOC100282395 uncharacterized LOC100282018 protein cornichon homolog 1 protein cornichon homolog 1 protein cornichon homolog 4 protein cornichon homolog 4-like protein cornichon homolog 1-like protein cornichon homolog 1 protein cornichon homolog 4 protein cornichon homolog 4 protein cornichon homolog 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra04144 Endocytosis 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 2
ghi00670 One carbon pool by folate 2
ghi01200 Carbon metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 2
cit01200 Carbon metabolism 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01232 Nucleotide metabolism 3
gma00240 Pyrimidine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00510 N-Glycan biosynthesis 2
ppo00564 Glycerophospholipid metabolism 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 3
mtr03010 Ribosome 3
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr04144 Endocytosis 2
mtr04141 Protein processing in endoplasmic reticulum 2
mtr03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
sly04120 Ubiquitin mediated proteolysis 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 3
zma00562 Inositol phosphate metabolism 2
zma04070 Phosphatidylinositol signaling system 2
zma04144 Endocytosis 2
zma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma03050 Proteasome 3
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 5
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
tae03083 Polycomb repressive complex 5
tae04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 4
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 4
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 8
cre04141 Protein processing in endoplasmic reticulum 4
cre00510 N-Glycan biosynthesis 3
cre00513 Various types of N-glycan biosynthesis 3
cre03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837788 837794 842589 103870265 103872008 103836165 106382392 106399336 106435406 107891277 107963660 107941641 102618579 102627512 102611772 100813058 100792093 100246981 100258514 18094416 7465811 25480860 11412023 11429160 101264011 101256299 101249895 102605899 102586917 102600230 107831335 107801101 107820840 4340041 4352293 103650597 100282395 100282018 123102728 123119907 123165977 123409931 123395483 8064122 8069084 100834949 100831579 5715479
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