ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	HCF243	Serine/Threonine-kinase pakA-like protein
ath-u.5	HCF243	Serine/Threonine-kinase pakA-like protein
ath-r.7	HCF243	Serine/Threonine-kinase pakA-like protein
ath-e.2	HCF243	Serine/Threonine-kinase pakA-like protein
ath-m.4.bio	HCF243	Serine/Threonine-kinase pakA-like protein
ath-m.4.hor	HCF243	Serine/Threonine-kinase pakA-like protein
ath-m.4.lig	HCF243	Serine/Threonine-kinase pakA-like protein
ath-m.4.str	HCF243	Serine/Threonine-kinase pakA-like protein
ath-m.4.tis	HCF243	Serine/Threonine-kinase pakA-like protein
bra-r.6	103869956	uncharacterized LOC103869956
bna-r.1	106400884	micronuclear linker histone polyprotein
ghi-r.1	107918877	suppressor protein SRP40
ghi-r.1	107926151	suppressor protein SRP40
ghi-r.1	107920247	uncharacterized LOC107920247
cit-r.1	102621897	uncharacterized LOC102621897
gma-u.5	100818049	uncharacterized LOC100818049
gma-u.5	100801731	SUN domain-containing protein 2
vvi-u.5	100257171	uncharacterized LOC100257171
ppo-u.5	7463790	uncharacterized LOC7463790
ppo-u.5	18095385	uncharacterized LOC18095385
mtr-u.5	25487287	uncharacterized LOC25487287
sly-u.5	101262936	uncharacterized LOC101262936
sly-u.5	101254764	uncharacterized LOC101254764
sot-r.1	107060804	pinin-like
sot-r.1	102593290	uncharacterized LOC102593290
nta-r.1	107804139	uncharacterized LOC107804139
nta-r.1	107812341	uncharacterized LOC107812341
nta-r.1	107822310	uncharacterized LOC107822310
osa-u.5	4340984	uncharacterized LOC4340984
tae-r.2	123183155	uncharacterized LOC123183155
tae-r.2	123146316	uncharacterized abhydrolase domain-containing protein DDB_G0269086
tae-r.2	123068595	uncharacterized LOC123068595
hvu-r.1	123450635	uncharacterized LOC123450635
bdi-r.1	100841524	uncharacterized LOC100841524

Annotation

functional annotation

KEGG

GO BP

GO:0010207 [list] [network] photosystem II assembly

(27 genes)

IMP

GO CC

GO:0009507 [list] [network] chloroplast	(5014 genes)	IDA
GO:0005634 [list] [network] nucleus	(10367 genes)	ISM

GO MF

Protein

NP_001078157.1 [sequence] [blastp]
NP_001118630.1 [sequence] [blastp]
NP_188128.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, nucl 4, mito 2, cyto_nucl 2	(predict for NP_001078157.1)
cyto 5, nucl 2, pero 1, nucl_plas 1	(predict for NP_001118630.1)
nucl 9, cyto_nucl 5	(predict for NP_188128.1)

Subcellular
localization
TargetP

mito 5, other 3	(predict for NP_001078157.1)
other 6, chlo 3	(predict for NP_001118630.1)
chlo 9	(predict for NP_188128.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for HCF243	ath-u.5 for HCF243	ath-r.7 for HCF243	ath-e.2 for HCF243	ath-m.4.bio for HCF243	ath-m.4.hor for HCF243	ath-m.4.lig for HCF243	ath-m.4.str for HCF243	ath-m.4.tis for HCF243	bra-r.6 for 103869956	bna-r.1 for 106400884	ghi-r.1 for 107918877	ghi-r.1 for 107926151	ghi-r.1 for 107920247	cit-r.1 for 102621897	gma-u.5 for 100818049	gma-u.5 for 100801731	vvi-u.5 for 100257171	ppo-u.5 for 7463790	ppo-u.5 for 18095385	mtr-u.5 for 25487287	sly-u.5 for 101262936	sly-u.5 for 101254764	sot-r.1 for 107060804	sot-r.1 for 102593290	nta-r.1 for 107804139	nta-r.1 for 107812341	nta-r.1 for 107822310	osa-u.5 for 4340984	tae-r.2 for 123183155	tae-r.2 for 123146316	tae-r.2 for 123068595	hvu-r.1 for 123450635	bdi-r.1 for 100841524