ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	AT3G15630	plant/protein
ath-u.5	AT3G15630	plant/protein
ath-r.7	AT3G15630	plant/protein
ath-e.2	AT3G15630	plant/protein
ath-m.4.bio	AT3G15630	plant/protein
ath-m.4.hor	AT3G15630	plant/protein
ath-m.4.lig	AT3G15630	plant/protein
ath-m.4.str	AT3G15630	plant/protein
ath-m.4.tis	AT3G15630	plant/protein
ath-u.5	AT1G52720	uncharacterized protein
bra-r.6	103859629	uncharacterized LOC103859629
bra-r.6	103868482	uncharacterized LOC103868482
bna-r.1	125598505	uncharacterized LOC125598505
bna-r.1	106445724	uncharacterized LOC106445724
bna-r.1	BNAANNG26280D	uncharacterized BNAANNG26280D
ghi-r.1	107897217	uncharacterized LOC107897217
ghi-r.1	121220001	uncharacterized LOC121220001
ghi-r.1	121217699	uncharacterized LOC121217699
cit-r.1	102611870	hypothetical protein
cit-r.1	102618454	uncharacterized LOC102618454
gma-u.5	100778751	uncharacterized LOC100778751
gma-u.5	100776958	uncharacterized LOC100776958
gma-u.5	100306235	uncharacterized LOC100306235
vvi-u.5	100244679	uncharacterized LOC100244679
vvi-u.5	100854031	uncharacterized LOC100854031
ppo-u.5	7478123	uncharacterized LOC7478123
ppo-u.5	7475724	uncharacterized LOC7475724
mtr-u.5	11444413	uncharacterized LOC11444413
sly-u.5	101251567	uncharacterized LOC101251567
sot-r.1	102589421	uncharacterized LOC102589421
osa-u.5	4327132	protein THYLAKOID RHODANESE-LIKE, chloroplastic-like
osa-u.5	4337962	uncharacterized LOC4337962
zma-u.5	103630076	uncharacterized LOC103630076
zma-u.5	100277712	uncharacterized LOC100277712
tae-r.2	123058043	uncharacterized LOC123058043
hvu-r.1	123407969	uncharacterized LOC123407969
hvu-r.1	123407980	uncharacterized LOC123407980
hvu-r.1	123407989	uncharacterized LOC123407989
sbi-r.1	8080955	uncharacterized LOC8080955
sbi-r.1	8078797	uncharacterized LOC8078797
sbi-r.1	8072712	translation initiation factor IF-2
bdi-r.1	100821923	uncharacterized LOC100821923
bdi-r.1	100844174	uncharacterized LOC100844174
bdi-r.1	100844466	uncharacterized LOC100844466

Top 50 coexpressed genes to AT3G15630 (ath-m.9 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT3G15630 (ath-m.9 coexpression data)

CoexMap"820805"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

Protein

NP_566521.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, mito 2, nucl 1, mito_plas 1

(predict for NP_566521.1)

Subcellular
localization
TargetP

chlo 9

(predict for NP_566521.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AT3G15630	ath-u.5 for AT3G15630	ath-r.7 for AT3G15630	ath-e.2 for AT3G15630	ath-m.4.bio for AT3G15630	ath-m.4.hor for AT3G15630	ath-m.4.lig for AT3G15630	ath-m.4.str for AT3G15630	ath-m.4.tis for AT3G15630	ath-u.5 for AT1G52720	bra-r.6 for 103859629	bra-r.6 for 103868482	bna-r.1 for 125598505	bna-r.1 for 106445724	bna-r.1 for BNAANNG26280D	ghi-r.1 for 107897217	ghi-r.1 for 121220001	ghi-r.1 for 121217699	cit-r.1 for 102611870	cit-r.1 for 102618454	gma-u.5 for 100778751	gma-u.5 for 100776958	gma-u.5 for 100306235	vvi-u.5 for 100244679	vvi-u.5 for 100854031	ppo-u.5 for 7478123	ppo-u.5 for 7475724	mtr-u.5 for 11444413	sly-u.5 for 101251567	sot-r.1 for 102589421	osa-u.5 for 4327132	osa-u.5 for 4337962	zma-u.5 for 103630076	zma-u.5 for 100277712	tae-r.2 for 123058043	hvu-r.1 for 123407969	hvu-r.1 for 123407980	hvu-r.1 for 123407989	sbi-r.1 for 8080955	sbi-r.1 for 8078797	sbi-r.1 for 8072712	bdi-r.1 for 100821923	bdi-r.1 for 100844174	bdi-r.1 for 100844466

Ortholog

Ortholog ID: 2218

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

plant/protein

uncharacterized protein

uncharacterized LOC103859629

uncharacterized LOC103868482

uncharacterized LOC125598505

uncharacterized LOC106445724

uncharacterized BNAC03G39190D

uncharacterized LOC107897217

uncharacterized LOC107909226

uncharacterized LOC107901187

hypothetical protein

uncharacterized LOC102618454

uncharacterized LOC100776958

uncharacterized LOC100306235

uncharacterized LOC100780553

uncharacterized LOC100244679

uncharacterized LOC100854031

uncharacterized LOC7478123

uncharacterized LOC7475724

uncharacterized LOC11444413

uncharacterized LOC101251567

uncharacterized LOC102589421

protein THYLAKOID RHODANESE-LIKE, chloroplastic-like

uncharacterized LOC4337962

uncharacterized LOC103630076

uncharacterized LOC100277712

uncharacterized LOC123089228

uncharacterized LOC123166576

uncharacterized LOC123166582

uncharacterized LOC123407969

uncharacterized LOC123407980

uncharacterized LOC123426877

uncharacterized LOC8080955

uncharacterized LOC8078797

translation initiation factor IF-2

uncharacterized LOC100821923

uncharacterized LOC100844174

uncharacterized LOC100844466

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00592	alpha-Linolenic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00053	Ascorbate and aldarate metabolism	2
ghi00562	Inositol phosphate metabolism	2
ghi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00740	Riboflavin metabolism	2
ghi01240	Biosynthesis of cofactors	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00905	Brassinosteroid biosynthesis	2
ghi00073	Cutin, suberine and wax biosynthesis	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

820805

841705

103859629

103868482

125598505

106445724

106406732

107897217

107909226

107901187

102611870

102618454

100776958

100306235

100780553

100244679

100854031

7478123

7475724

11444413

101251567

102589421

4327132

4337962

103630076

100277712

123089228

123166576

123166582

123407969

123407980

123426877

8080955

8078797

8072712

100821923

100844174

100844466

The preparation time of this page was 0.2 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	osa	zma	tae	hvu	sbi	bdi	cre	nta
Paralog	10	2	3	3	2	3	2	2	1	1	1	2	2	1	3	3	3	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT3G15630 (ath-m.9 coexpression data)

Top 50 enrichment test to AT3G15630 (ath-m.9 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**