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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   BSH   transcription regulatory protein SNF5, putative (BSH) 
 ath-u.5   BSH   transcription regulatory protein SNF5, putative (BSH) 
 ath-r.7   BSH   transcription regulatory protein SNF5, putative (BSH) 
 ath-e.2   BSH   transcription regulatory protein SNF5, putative (BSH) 
 ath-m.4.bio   BSH   transcription regulatory protein SNF5, putative (BSH) 
 ath-m.4.hor   BSH   transcription regulatory protein SNF5, putative (BSH) 
 ath-m.4.lig   BSH   transcription regulatory protein SNF5, putative (BSH) 
 ath-m.4.str   BSH   transcription regulatory protein SNF5, putative (BSH) 
 ath-m.4.tis   BSH   transcription regulatory protein SNF5, putative (BSH) 
 bra-r.6   103869676   chromatin structure-remodeling complex protein BSH 
 bna-r.1   125609009   chromatin structure-remodeling complex protein BSH 
 bna-r.1   106422862   chromatin structure-remodeling complex protein BSH-like 
 bna-r.1   106345287   chromatin structure-remodeling complex protein BSH 
 ghi-r.1   107908713   chromatin structure-remodeling complex protein BSH 
 ghi-r.1   107907529   chromatin structure-remodeling complex protein BSH 
 ghi-r.1   107907386   chromatin structure-remodeling complex protein BSH 
 cit-r.1   102630390   chromatin structure-remodeling complex protein BSH 
 gma-u.5   SNF5   chromatin structure-remodeling complex protein BSH-like 
 vvi-u.5   100249448   chromatin structure-remodeling complex protein BSH 
 ppo-u.5   7496492   chromatin structure-remodeling complex protein BSH 
 mtr-u.5   11438224   chromatin structure-remodeling complex protein BSH 
 sly-u.5   101255453   chromatin structure-remodeling complex protein BSH 
 sot-r.1   102584822   chromatin structure-remodeling complex protein BSH-like 
 sot-r.1   102582388   chromatin structure-remodeling complex protein BSH 
 nta-r.1   107765782   chromatin structure-remodeling complex protein BSH 
 nta-r.1   107766183   chromatin structure-remodeling complex protein BSH 
 osa-u.5   4330573   chromatin structure-remodeling complex protein BSH 
 zma-u.5   100191936   SWI/SNF, matrix-associated, actin-dependent regulator of chromatin subfamily B member 1 
 tae-r.2   123110967   chromatin structure-remodeling complex protein BSH 
 tae-r.2   123180358   chromatin structure-remodeling complex protein BSH 
 tae-r.2   123190533   chromatin structure-remodeling complex protein BSH 
 hvu-r.1   123423952   chromatin structure-remodeling complex protein BSH 
 sbi-r.1   8068206   chromatin structure-remodeling complex protein BSH 
 bdi-r.1   100837874   chromatin structure-remodeling complex protein BSH 
 cre-r.1   CHLRE_14g619613v5   uncharacterized protein 

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Top 50 coexpressed genes to BSH (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to BSH (ath-m.9 coexpression data)

CoexMap"821025"


athBSH | Entrez gene ID : 821025      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 3 3 1 1 1 1 1 1 2 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03082 [list] [network] ATP-dependent chromatin remodeling (64 genes)
ath03250 [list] [network] Viral life cycle - HIV-1 (39 genes)
GO BP
GO:0006338 [list] [network] chromatin remodeling  (210 genes)  ISS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0003682 [list] [network] chromatin binding  (103 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001189918.1 [sequence] [blastp]
NP_001326663.1 [sequence] [blastp]
NP_566581.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  mito 3,  chlo_mito 3,  nucl 2  (predict for NP_001189918.1)
chlo 3,  nucl 3,  cyto 1,  mito 1,  cysk_nucl 1  (predict for NP_001326663.1)
chlo 4,  cyto 2,  mito 2,  nucl 1,  mito_plas 1,  cyto_plas 1  (predict for NP_566581.1)
Subcellular
localization
TargetP
mito 8,  other 3  (predict for NP_001189918.1)
mito 5,  other 5  (predict for NP_001326663.1)
mito 5,  other 5  (predict for NP_566581.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
BSH
ath-u.5
for
BSH
ath-r.7
for
BSH
ath-e.2
for
BSH
ath-m.4.bio
for
BSH
ath-m.4.hor
for
BSH
ath-m.4.lig
for
BSH
ath-m.4.str
for
BSH
ath-m.4.tis
for
BSH
bra-r.6
for
103869676
bna-r.1
for
125609009
bna-r.1
for
106422862
bna-r.1
for
106345287
ghi-r.1
for
107908713
ghi-r.1
for
107907529
ghi-r.1
for
107907386
cit-r.1
for
102630390
gma-u.5
for
SNF5
vvi-u.5
for
100249448
ppo-u.5
for
7496492
mtr-u.5
for
11438224
sly-u.5
for
101255453
sot-r.1
for
102584822
sot-r.1
for
102582388
nta-r.1
for
107765782
nta-r.1
for
107766183
osa-u.5
for
4330573
zma-u.5
for
100191936
tae-r.2
for
123110967
tae-r.2
for
123180358
tae-r.2
for
123190533
hvu-r.1
for
123423952
sbi-r.1
for
8068206
bdi-r.1
for
100837874
cre-r.1
for
CHLRE_14g619613v5


Ortholog ID: 7574
Species ath bra bna bna bna ghi ghi ghi cit gma vvi ppo mtr sly sot sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol BSH LOC103869676 LOC125609009 LOC106422862 LOC106345287 LOC107908713 LOC107907386 LOC107886895 LOC102630390 SNF5 LOC100249448 LOC7496492 LOC11438224 LOC101255453 LOC102584822 LOC102582388 LOC107765782 LOC107766183 LOC4330573 LOC100191936 LOC123110967 LOC123180358 LOC123190533 LOC123423952 LOC8068206 LOC100837874 CHLRE_14g619613v5
Function* transcription regulatory protein SNF5, putative (BSH) chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH-like chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH-like chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH-like chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH SWI/SNF, matrix-associated, actin-dependent regulator of chromatin subfamily B member 1 chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03082 ATP-dependent chromatin remodeling 3
bna03250 Viral life cycle - HIV-1 3
bna00270 Cysteine and methionine metabolism 2
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 3
bna03250 Viral life cycle - HIV-1 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03082 ATP-dependent chromatin remodeling 3
bna03250 Viral life cycle - HIV-1 3
bna00270 Cysteine and methionine metabolism 2
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
cit03060 Protein export 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03040 Spliceosome 3
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly03420 Nucleotide excision repair 3
sly03440 Homologous recombination 2
sly03040 Spliceosome 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
sot03082 ATP-dependent chromatin remodeling 2
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03250 Viral life cycle - HIV-1 2
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03250 Viral life cycle - HIV-1 2
nta04136 Autophagy - other 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 2
sbi03030 DNA replication 2
sbi03082 ATP-dependent chromatin remodeling 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821025 103869676 125609009 106422862 106345287 107908713 107907386 107886895 102630390 100818624 100249448 7496492 11438224 101255453 102584822 102582388 107765782 107766183 4330573 100191936 123110967 123180358 123190533 123423952 8068206 100837874 5715878
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