ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	MED6	RNA polymerase transcriptional regulation mediator-like protein
ath-u.5	MED6	RNA polymerase transcriptional regulation mediator-like protein
ath-r.7	MED6	RNA polymerase transcriptional regulation mediator-like protein
ath-e.2	MED6	RNA polymerase transcriptional regulation mediator-like protein
ath-m.4.bio	MED6	RNA polymerase transcriptional regulation mediator-like protein
ath-m.4.hor	MED6	RNA polymerase transcriptional regulation mediator-like protein
ath-m.4.lig	MED6	RNA polymerase transcriptional regulation mediator-like protein
ath-m.4.str	MED6	RNA polymerase transcriptional regulation mediator-like protein
ath-m.4.tis	MED6	RNA polymerase transcriptional regulation mediator-like protein
bra-r.6	103869179	mediator of RNA polymerase II transcription subunit 6
bna-r.1	125603028	mediator of RNA polymerase II transcription subunit 6-like
bna-r.1	106446006	mediator of RNA polymerase II transcription subunit 6
bna-r.1	106390770	mediator of RNA polymerase II transcription subunit 6-like
ghi-r.1	107916333	mediator of RNA polymerase II transcription subunit 6
ghi-r.1	107958045	mediator of RNA polymerase II transcription subunit 6
ghi-r.1	121222356	mediator of RNA polymerase II transcription subunit 6
cit-r.1	102622399	mediator of RNA polymerase II transcription subunit 6
gma-u.5	106799203	mediator of RNA polymerase II transcription subunit 6
gma-u.5	100792248	mediator of RNA polymerase II transcription subunit 6
vvi-u.5	100253150	mediator of RNA polymerase II transcription subunit 6
mtr-u.5	25500369	mediator of RNA polymerase II transcription subunit 6
sly-u.5	101249154	mediator of RNA polymerase II transcription subunit 6
sly-u.5	101250585	mediator of RNA polymerase II transcription subunit 6
sot-r.1	102601226	mediator of RNA polymerase II transcription subunit 6
nta-r.1	107782641	mediator of RNA polymerase II transcription subunit 6-like
nta-r.1	107793285	mediator of RNA polymerase II transcription subunit 6
osa-u.5	4340496	mediator of RNA polymerase II transcription subunit 6
zma-u.5	100279775	uncharacterized LOC100279775
tae-r.2	123159669	mediator of RNA polymerase II transcription subunit 6
tae-r.2	123165554	mediator of RNA polymerase II transcription subunit 6
tae-r.2	123150746	mediator of RNA polymerase II transcription subunit 6
hvu-r.1	123410497	mediator of RNA polymerase II transcription subunit 6
sbi-r.1	8080033	mediator of RNA polymerase II transcription subunit 6
bdi-r.1	100821382	mediator of RNA polymerase II transcription subunit 6
cre-r.1	CHLRE_11g467659v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0016592 [list] [network] mediator complex	(45 genes)	IDA
GO:0005634 [list] [network] nucleus	(10367 genes)	ISM

GO MF

GO:0005515 [list] [network] protein binding

(5363 genes)

IPI

Protein

NP_001154633.1 [sequence] [blastp]
NP_188772.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, mito 1, plas 1, mito_plas 1, nucl 1, cysk_nucl 1, golg_plas 1, cyto_plas 1	(predict for NP_001154633.1)
nucl 4, cyto_nucl 3, cysk 1, cyto 1, cysk_plas 1, chlo 1, mito 1, plas 1, extr 1, chlo_mito 1, mito_plas 1	(predict for NP_188772.2)

Subcellular
localization
TargetP

other 7	(predict for NP_001154633.1)
other 7	(predict for NP_188772.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for MED6	ath-u.5 for MED6	ath-r.7 for MED6	ath-e.2 for MED6	ath-m.4.bio for MED6	ath-m.4.hor for MED6	ath-m.4.lig for MED6	ath-m.4.str for MED6	ath-m.4.tis for MED6	bra-r.6 for 103869179	bna-r.1 for 125603028	bna-r.1 for 106446006	bna-r.1 for 106390770	ghi-r.1 for 107916333	ghi-r.1 for 107958045	ghi-r.1 for 121222356	cit-r.1 for 102622399	gma-u.5 for 106799203	gma-u.5 for 100792248	vvi-u.5 for 100253150	mtr-u.5 for 25500369	sly-u.5 for 101249154	sly-u.5 for 101250585	sot-r.1 for 102601226	nta-r.1 for 107782641	nta-r.1 for 107793285	osa-u.5 for 4340496	zma-u.5 for 100279775	tae-r.2 for 123159669	tae-r.2 for 123165554	tae-r.2 for 123150746	hvu-r.1 for 123410497	sbi-r.1 for 8080033	bdi-r.1 for 100821382	cre-r.1 for CHLRE_11g467659v5

Ortholog

Ortholog ID: 8476

Species

ath

bra

bna

ghi

cit

gma

vvi

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

MED6

Function^*

RNA polymerase transcriptional regulation mediator-like protein