Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   XTH3   xyloglucan endotransglucosylase/hydrolase 3 
 ath-u.5   XTH3   xyloglucan endotransglucosylase/hydrolase 3 
 ath-r.7   XTH3   xyloglucan endotransglucosylase/hydrolase 3 
 ath-e.2   XTH3   xyloglucan endotransglucosylase/hydrolase 3 
 ath-m.4.bio   XTH3   xyloglucan endotransglucosylase/hydrolase 3 
 ath-m.4.hor   XTH3   xyloglucan endotransglucosylase/hydrolase 3 
 ath-m.4.lig   XTH3   xyloglucan endotransglucosylase/hydrolase 3 
 ath-m.4.str   XTH3   xyloglucan endotransglucosylase/hydrolase 3 
 ath-m.4.tis   XTH3   xyloglucan endotransglucosylase/hydrolase 3 
 ghi-r.1   107938981   xyloglucan endotransglucosylase/hydrolase protein 2 
 gma-u.5   100799673   xyloglucan endotransglucosylase/hydrolase protein 2 
 vvi-u.5   100855249   putative xyloglucan endotransglucosylase/hydrolase protein 1 
 nta-r.1   107783488   xyloglucan endotransglucosylase/hydrolase protein 2-like 
 zma-u.5   100284097   xyloglucan endotransglucosylase/hydrolase protein 1 

close


Top 50 coexpressed genes to XTH3 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to XTH3 (ath-m.9 coexpression data)

CoexMap"822096"


athXTH3 | Entrez gene ID : 822096      
Species ath ghi gma vvi nta zma cit mtr osa ppo hvu cre sot tae bdi sbi bra sly bna
Paralog 9 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010411 [list] [network] xyloglucan metabolic process  (36 genes)  IEA  
GO:0030243 [list] [network] cellulose metabolic process  (44 genes)  IDA  
GO:0048573 [list] [network] photoperiodism, flowering  (77 genes)  IMP  
GO:0009832 [list] [network] plant-type cell wall biogenesis  (138 genes)  ISS  
GO CC
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO MF
GO:0016762 [list] [network] xyloglucan:xyloglucosyl transferase activity  (25 genes)  IDA ISS  
GO:0030247 [list] [network] polysaccharide binding  (96 genes)  ISS  
GO:0004553 [list] [network] hydrolase activity, hydrolyzing O-glycosyl compounds  (292 genes)  IEA  
Protein NP_189141.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 1,  extr 1,  cyto 1,  vacu 1,  E.R. 1,  cysk_nucl 1,  nucl_plas 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_189141.1)
Subcellular
localization
TargetP
scret 8  (predict for NP_189141.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
XTH3
ath-u.5
for
XTH3
ath-r.7
for
XTH3
ath-e.2
for
XTH3
ath-m.4.bio
for
XTH3
ath-m.4.hor
for
XTH3
ath-m.4.lig
for
XTH3
ath-m.4.str
for
XTH3
ath-m.4.tis
for
XTH3
ghi-r.1
for
107938981
gma-u.5
for
100799673
vvi-u.5
for
100855249
nta-r.1
for
107783488
zma-u.5
for
100284097


Ortholog ID: 2476
Species ath ghi gma vvi zma
Symbol XTH3 LOC107938981 LOC100799673 LOC100855249 LOC100284097
Function* xyloglucan endotransglucosylase/hydrolase 3 xyloglucan endotransglucosylase/hydrolase protein 2 xyloglucan endotransglucosylase/hydrolase protein 2 putative xyloglucan endotransglucosylase/hydrolase protein 1 xyloglucan endotransglucosylase/hydrolase protein 1
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00909 Sesquiterpenoid and triterpenoid biosynthesis 4
vvi00040 Pentose and glucuronate interconversions 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822096 107938981 100799673 100855249 100284097
The preparation time of this page was 1.0 [sec].