ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	AT3G28600	P-loop containing nucleoside triphosphate hydrolases superfamily protein
ath-u.5	AT3G28600	P-loop containing nucleoside triphosphate hydrolases superfamily protein
ath-r.7	AT3G28600	P-loop containing nucleoside triphosphate hydrolases superfamily protein
ath-e.2	AT3G28600	P-loop containing nucleoside triphosphate hydrolases superfamily protein
ath-m.4.bio	AT3G28600	P-loop containing nucleoside triphosphate hydrolases superfamily protein
ath-m.4.hor	AT3G28600	P-loop containing nucleoside triphosphate hydrolases superfamily protein
ath-m.4.lig	AT3G28600	P-loop containing nucleoside triphosphate hydrolases superfamily protein
ath-m.4.str	AT3G28600	P-loop containing nucleoside triphosphate hydrolases superfamily protein
ath-m.4.tis	AT3G28600	P-loop containing nucleoside triphosphate hydrolases superfamily protein
ath-u.5	AT3G28510	P-loop containing nucleoside triphosphate hydrolases superfamily protein
ath-u.5	AATP1	AAA-ATPase 1
ath-u.5	AT5G40000	P-loop containing nucleoside triphosphate hydrolases superfamily protein
bra-r.6	103873807	AAA-ATPase ASD, mitochondrial
bra-r.6	103854191	AAA-ATPase At3g28510
bra-r.6	103850306	AAA-ATPase At3g28600
bna-r.1	106412567	AAA-ATPase At3g28600-like
ghi-r.1	107892327	AAA-ATPase ASD, mitochondrial
ghi-r.1	107911789	AAA-ATPase ASD, mitochondrial
ghi-r.1	107912158	AAA-ATPase ASD, mitochondrial
cit-r.1	102625447	AAA-ATPase ASD, mitochondrial-like
cit-r.1	102614176	AAA-ATPase ASD, mitochondrial-like
gma-u.5	100813126	AAA-ATPase ASD, mitochondrial
gma-u.5	100798981	AAA-ATPase At3g28580
vvi-u.5	109121427	AAA-ATPase At3g28580
ppo-u.5	7487192	AAA-ATPase ASD, mitochondrial
mtr-u.5	11441129	AAA-ATPase At3g28510
mtr-u.5	25482136	AAA-ATPase At3g28510
mtr-u.5	11421813	AAA-ATPase ASD, mitochondrial
sly-u.5	101247583	AAA-ATPase At3g28510-like
sly-u.5	101247884	AAA-ATPase At3g28510-like
sly-u.5	101247288	AAA-ATPase At3g28600-like
sot-r.1	102595016	AAA-ATPase ASD, mitochondrial-like
sot-r.1	102605456	AAA-ATPase At3g28610-like
sot-r.1	102578794	AAA-ATPase At3g28580-like
nta-r.1	107795899	AAA-ATPase At3g28580-like
nta-r.1	107795906	AAA-ATPase At3g28580-like
nta-r.1	107797936	AAA-ATPase At3g28580-like
osa-u.5	4342631	AAA-ATPase ASD, mitochondrial
osa-u.5	4352116	AAA-ATPase ASD, mitochondrial
zma-u.5	100281142	uncharacterized LOC100281142
zma-u.5	100281734	ATPase 3
zma-u.5	100383595	AAA-ATPase ASD mitochondrial
tae-r.2	123110054	AAA-ATPase ASD, mitochondrial
tae-r.2	123119028	AAA-ATPase ASD, mitochondrial
hvu-r.1	123442486	AAA-ATPase ASD, mitochondrial-like
hvu-r.1	123399149	AAA-ATPase ASD, mitochondrial-like
hvu-r.1	123397840	AAA-ATPase ASD, mitochondrial-like
sbi-r.1	8072880	AAA-ATPase ASD, mitochondrial
sbi-r.1	8065260	AAA-ATPase ASD, mitochondrial
sbi-r.1	8075076	AAA-ATPase ASD, mitochondrial
bdi-r.1	100841076	AAA-ATPase ASD, mitochondrial
bdi-r.1	100830055	AAA-ATPase ASD, mitochondrial
bdi-r.1	100846029	AAA-ATPase At3g28580

Top 50 coexpressed genes to AT3G28600 (ath-m.9 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT3G28600 (ath-m.9 coexpression data)

CoexMap"822490"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0009651 [list] [network] response to salt stress

(473 genes)

IEP

GO CC

GO:0005886 [list] [network] plasma membrane	(2598 genes)	ISM
GO:0009507 [list] [network] chloroplast	(5014 genes)	ISM

GO MF

GO:0016887 [list] [network] ATP hydrolysis activity

(205 genes)

IEA

Protein

NP_001326022.1 [sequence] [blastp]
NP_189501.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, vacu 2, nucl 1	(predict for NP_001326022.1)
chlo 6, vacu 2, nucl 1	(predict for NP_189501.2)

Subcellular
localization
TargetP

scret 9	(predict for NP_001326022.1)
scret 9	(predict for NP_189501.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AT3G28600	ath-u.5 for AT3G28600	ath-r.7 for AT3G28600	ath-e.2 for AT3G28600	ath-m.4.bio for AT3G28600	ath-m.4.hor for AT3G28600	ath-m.4.lig for AT3G28600	ath-m.4.str for AT3G28600	ath-m.4.tis for AT3G28600	ath-u.5 for AT3G28510	ath-u.5 for AATP1	ath-u.5 for AT5G40000	bra-r.6 for 103873807	bra-r.6 for 103854191	bra-r.6 for 103850306	bna-r.1 for 106412567	ghi-r.1 for 107892327	ghi-r.1 for 107911789	ghi-r.1 for 107912158	cit-r.1 for 102625447	cit-r.1 for 102614176	gma-u.5 for 100813126	gma-u.5 for 100798981	vvi-u.5 for 109121427	ppo-u.5 for 7487192	mtr-u.5 for 11441129	mtr-u.5 for 25482136	mtr-u.5 for 11421813	sly-u.5 for 101247583	sly-u.5 for 101247884	sly-u.5 for 101247288	sot-r.1 for 102595016	sot-r.1 for 102605456	sot-r.1 for 102578794	nta-r.1 for 107795899	nta-r.1 for 107795906	nta-r.1 for 107797936	osa-u.5 for 4342631	osa-u.5 for 4352116	zma-u.5 for 100281142	zma-u.5 for 100281734	zma-u.5 for 100383595	tae-r.2 for 123110054	tae-r.2 for 123119028	hvu-r.1 for 123442486	hvu-r.1 for 123399149	hvu-r.1 for 123397840	sbi-r.1 for 8072880	sbi-r.1 for 8065260	sbi-r.1 for 8075076	bdi-r.1 for 100841076	bdi-r.1 for 100830055	bdi-r.1 for 100846029

Ortholog

Ortholog ID: 341

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

AATP1

Function^*

P-loop containing nucleoside triphosphate hydrolases superfamily protein

AAA-ATPase 1

P-loop containing nucleoside triphosphate hydrolases superfamily protein

AAA-ATPase ASD, mitochondrial

AAA-ATPase At3g28600

AAA-ATPase At3g28600-like

AAA-ATPase At3g28510-like

AAA-ATPase ASD, mitochondrial

AAA-ATPase At3g28580

AAA-ATPase ASD, mitochondrial

AAA-ATPase ASD, mitochondrial-like

AAA-ATPase ASD, mitochondrial

AAA-ATPase At3g28580

AAA-ATPase ASD, mitochondrial

AAA-ATPase At3g28580

AAA-ATPase ASD, mitochondrial

AAA-ATPase At3g28510-like

AAA-ATPase At3g28600-like

probable choline kinase 2

AAA-ATPase At3g28610-like

AAA-ATPase At3g28580-like

AAA-ATPase At3g28510-like

AAA-ATPase At3g28610-like

AAA-ATPase At3g28510-like

AAA-ATPase ASD, mitochondrial

uncharacterized LOC100281142

ATPase 3

AAA-ATPase ASD mitochondrial

AAA-ATPase At3g28580-like

AAA-ATPase ASD, mitochondrial-like

AAA-ATPase At3g28580-like

AAA-ATPase ASD, mitochondrial

AAA-ATPase At3g28580

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00592	alpha-Linolenic acid metabolism	3
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	5
vvi00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	3
ppo04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	2
sly03013	Nucleocytoplasmic transport	2
sly03015	mRNA surveillance pathway	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00480	Glutathione metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	2
tae00940	Phenylpropanoid biosynthesis	2
tae04016	MAPK signaling pathway - plant	2
tae04075	Plant hormone signal transduction	2
tae04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01240	Biosynthesis of cofactors	2
sbi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	4
bdi01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	2

Expression

Expression pattern

Entrez Gene ID^*

822481

833998

833997

103873807

103850306

106412567

125606434

125575941

107923266

107958601

121209608

102625447

102614176

102614646

100813126

100798981

100252443

100242191

112325816

11419690

11407637

25493792

101247583

101247288

101264174

102605456

102578794

102605122

107809561

107783715

107790138

4342631

4352116

4352915

100281142

100281734

100383595

123146834

123442486

123395351

8072880

8065260

8075076

100841076

100830055

106866591

The preparation time of this page was 0.1 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	12	3	1	3	2	2	1	1	3	3	3	3	2	3	2	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT3G28600 (ath-m.9 coexpression data)

Top 50 enrichment test to AT3G28600 (ath-m.9 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**