ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	AT3G29185	glutamate NMDA receptor subunit epsilon-1, putative (DUF3598)
ath-u.5	AT3G29185	glutamate NMDA receptor subunit epsilon-1, putative (DUF3598)
ath-r.7	AT3G29185	glutamate NMDA receptor subunit epsilon-1, putative (DUF3598)
ath-e.2	AT3G29185	glutamate NMDA receptor subunit epsilon-1, putative (DUF3598)
ath-m.4.bio	AT3G29185	glutamate NMDA receptor subunit epsilon-1, putative (DUF3598)
ath-m.4.hor	AT3G29185	glutamate NMDA receptor subunit epsilon-1, putative (DUF3598)
ath-m.4.lig	AT3G29185	glutamate NMDA receptor subunit epsilon-1, putative (DUF3598)
ath-m.4.str	AT3G29185	glutamate NMDA receptor subunit epsilon-1, putative (DUF3598)
ath-m.4.tis	AT3G29185	glutamate NMDA receptor subunit epsilon-1, putative (DUF3598)
bra-r.6	103875096	uncharacterized LOC103875096
bna-r.1	106411222	uncharacterized LOC106411222
bna-r.1	106349130	uncharacterized LOC106349130
ghi-r.1	121229609	uncharacterized LOC121229609
ghi-r.1	107897373	uncharacterized LOC107897373
cit-r.1	102624426	uncharacterized LOC102624426
gma-u.5	100791812	uncharacterized LOC100791812
gma-u.5	100781931	uncharacterized LOC100781931
vvi-u.5	100262941	uncharacterized LOC100262941
ppo-u.5	7463032	uncharacterized LOC7463032
mtr-u.5	11416851	uncharacterized LOC11416851
sly-u.5	101245219	uncharacterized LOC101245219
sot-r.1	102600188	uncharacterized LOC102600188
nta-r.1	107790531	uncharacterized LOC107790531
nta-r.1	107762835	uncharacterized LOC107762835
osa-u.5	4334178	uncharacterized LOC4334178
zma-u.5	100276396	uncharacterized LOC100276396
zma-u.5	100501372	uncharacterized LOC100501372
tae-r.2	123122906	uncharacterized LOC123122906
tae-r.2	123113386	uncharacterized LOC123113386
tae-r.2	123105095	uncharacterized LOC123105095
hvu-r.1	123452330	uncharacterized LOC123452330
sbi-r.1	110430089	uncharacterized LOC110430089
bdi-r.1	100843913	uncharacterized LOC100843913

Annotation

functional annotation

KEGG

GO BP

GO:0033614 [list] [network] chloroplast proton-transporting ATP synthase complex assembly	(3 genes)	IMP
GO:0031334 [list] [network] positive regulation of protein-containing complex assembly	(6 genes)	IMP

GO CC

GO:0009570 [list] [network] chloroplast stroma	(693 genes)	IDA
GO:0009507 [list] [network] chloroplast	(5014 genes)	HDA ISM

GO MF

GO:0005515 [list] [network] protein binding

(5363 genes)

IPI

Protein

NP_001319666.1 [sequence] [blastp]
NP_189563.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, cyto 1, E.R. 1, cyto_E.R. 1	(predict for NP_001319666.1)
chlo 9	(predict for NP_189563.2)

Subcellular
localization
TargetP

scret 9	(predict for NP_001319666.1)
chlo 8	(predict for NP_189563.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AT3G29185	ath-u.5 for AT3G29185	ath-r.7 for AT3G29185	ath-e.2 for AT3G29185	ath-m.4.bio for AT3G29185	ath-m.4.hor for AT3G29185	ath-m.4.lig for AT3G29185	ath-m.4.str for AT3G29185	ath-m.4.tis for AT3G29185	bra-r.6 for 103875096	bna-r.1 for 106411222	bna-r.1 for 106349130	ghi-r.1 for 121229609	ghi-r.1 for 107897373	cit-r.1 for 102624426	gma-u.5 for 100791812	gma-u.5 for 100781931	vvi-u.5 for 100262941	ppo-u.5 for 7463032	mtr-u.5 for 11416851	sly-u.5 for 101245219	sot-r.1 for 102600188	nta-r.1 for 107790531	nta-r.1 for 107762835	osa-u.5 for 4334178	zma-u.5 for 100276396	zma-u.5 for 100501372	tae-r.2 for 123122906	tae-r.2 for 123113386	tae-r.2 for 123105095	hvu-r.1 for 123452330	sbi-r.1 for 110430089	bdi-r.1 for 100843913