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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G29375   XH domain-containing protein 
 ath-u.5   AT3G29375   XH domain-containing protein 
 ath-r.7   AT3G29375   XH domain-containing protein 
 ath-e.2   AT3G29375   XH domain-containing protein 
 ath-m.4.bio   AT3G29375   XH domain-containing protein 
 ath-m.4.hor   AT3G29375   XH domain-containing protein 
 ath-m.4.lig   AT3G29375   XH domain-containing protein 
 ath-m.4.str   AT3G29375   XH domain-containing protein 
 ath-m.4.tis   AT3G29375   XH domain-containing protein 
 bra-r.6   103853219   factor of DNA methylation 5 
 bna-r.1   125576694   factor of DNA methylation 5-like 
 ghi-r.1   121222578   uncharacterized LOC121222578 
 ghi-r.1   121222633   factor of DNA methylation 5 
 ghi-r.1   121222631   factor of DNA methylation 5 
 cit-r.1   102623368   factor of DNA methylation 5-like 
 vvi-u.5   104881133   factor of DNA methylation 5 
 tae-r.2   123052934   factor of DNA methylation 1 

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Top 50 coexpressed genes to AT3G29375 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G29375 (ath-m.9 coexpression data)

CoexMap"822597"


athAT3G29375 | Entrez gene ID : 822597      
Species ath bra bna ghi cit vvi tae sbi cre ppo mtr sly zma osa sot bdi gma nta hvu
Paralog 9 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080188 [list] [network] gene silencing by siRNA-directed DNA methylation  (44 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001190001.1 [sequence] [blastp]
NP_001326584.1 [sequence] [blastp]
NP_566849.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 2,  cysk 2,  nucl_plas 2  (predict for NP_001190001.1)
cyto 6,  cyto_E.R. 4,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_001326584.1)
nucl 7,  mito 1,  cyto 1,  pero 1,  chlo_mito 1,  cyto_mito 1,  cyto_pero 1,  mito_plas 1  (predict for NP_566849.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001190001.1)
other 8  (predict for NP_001326584.1)
other 3  (predict for NP_566849.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G29375
ath-u.5
for
AT3G29375
ath-r.7
for
AT3G29375
ath-e.2
for
AT3G29375
ath-m.4.bio
for
AT3G29375
ath-m.4.hor
for
AT3G29375
ath-m.4.lig
for
AT3G29375
ath-m.4.str
for
AT3G29375
ath-m.4.tis
for
AT3G29375
bra-r.6
for
103853219
bna-r.1
for
125576694
ghi-r.1
for
121222578
ghi-r.1
for
121222633
ghi-r.1
for
121222631
cit-r.1
for
102623368
vvi-u.5
for
104881133
tae-r.2
for
123052934


Ortholog ID: 4676
Species ath bra ghi ghi ghi cit vvi
Symbol AT3G29375 LOC103853219 LOC121222578 LOC107941484 LOC107942489 LOC102623368 LOC104881133
Function* XH domain-containing protein factor of DNA methylation 5 uncharacterized LOC121222578 factor of DNA methylation 1 factor of DNA methylation 1 factor of DNA methylation 5-like factor of DNA methylation 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822597 103853219 121222578 107941484 107942489 102623368 104881133
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