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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G44020   thylakoid lumenal P17.1 protein 
 ath-u.5   AT3G44020   thylakoid lumenal P17.1 protein 
 ath-r.7   AT3G44020   thylakoid lumenal P17.1 protein 
 ath-e.2   AT3G44020   thylakoid lumenal P17.1 protein 
 ath-m.4.bio   AT3G44020   thylakoid lumenal P17.1 protein 
 ath-m.4.hor   AT3G44020   thylakoid lumenal P17.1 protein 
 ath-m.4.lig   AT3G44020   thylakoid lumenal P17.1 protein 
 ath-m.4.str   AT3G44020   thylakoid lumenal P17.1 protein 
 ath-m.4.tis   AT3G44020   thylakoid lumenal P17.1 protein 
 bra-r.6   103848047   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 bna-r.1   111211609   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like 
 bna-r.1   106347700   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 ghi-r.1   107954230   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 ghi-r.1   107953145   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 cit-r.1   102619544   protein SPA, chloroplastic 
 gma-u.5   100305836   uncharacterized LOC100305836 
 vvi-u.5   100244480   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 ppo-u.5   7478596   protein disulfide-isomerase LQY1, chloroplastic 
 mtr-u.5   11431794   uncharacterized LOC11431794 
 sly-u.5   101260110   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 sot-r.1   102602654   protein SPA, chloroplastic 
 osa-u.5   4326942   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 zma-u.5   103636608   protein disulfide-isomerase LQY1, chloroplastic 
 tae-r.2   123070929   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 tae-r.2   123062196   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 tae-r.2   123079316   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 hvu-r.1   123444524   protein enabled homolog 
 sbi-r.1   8072130   protein disulfide-isomerase LQY1, chloroplastic 
 bdi-r.1   100843465   formin-like protein 5 
 cre-r.1   CHLRE_03g201050v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G44020 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G44020 (ath-m.9 coexpression data)

CoexMap"823519"


athAT3G44020 | Entrez gene ID : 823519      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot osa zma tae hvu sbi bdi cre nta
Paralog 9 1 2 2 1 1 1 1 1 1 1 1 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_189988.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  extr 1  (predict for NP_189988.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_189988.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G44020
ath-u.5
for
AT3G44020
ath-r.7
for
AT3G44020
ath-e.2
for
AT3G44020
ath-m.4.bio
for
AT3G44020
ath-m.4.hor
for
AT3G44020
ath-m.4.lig
for
AT3G44020
ath-m.4.str
for
AT3G44020
ath-m.4.tis
for
AT3G44020
bra-r.6
for
103848047
bna-r.1
for
111211609
bna-r.1
for
106347700
ghi-r.1
for
107954230
ghi-r.1
for
107953145
cit-r.1
for
102619544
gma-u.5
for
100305836
vvi-u.5
for
100244480
ppo-u.5
for
7478596
mtr-u.5
for
11431794
sly-u.5
for
101260110
sot-r.1
for
102602654
osa-u.5
for
4326942
zma-u.5
for
103636608
tae-r.2
for
123070929
tae-r.2
for
123062196
tae-r.2
for
123079316
hvu-r.1
for
123444524
sbi-r.1
for
8072130
bdi-r.1
for
100843465
cre-r.1
for
CHLRE_03g201050v5


Ortholog ID: 11691
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot osa zma tae tae tae hvu sbi bdi cre
Symbol AT3G44020 LOC103848047 LOC111211609 LOC106347700 LOC107954230 LOC107953145 LOC102619544 LOC100305836 LOC100244480 LOC7478596 LOC11431794 LOC101260110 LOC102602654 LOC4326942 LOC103636608 LOC123070929 LOC123062196 LOC123079316 LOC123444524 LOC8072130 LOC100843465 CHLRE_03g201050v5
Function* thylakoid lumenal P17.1 protein protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein SPA, chloroplastic uncharacterized LOC100305836 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein disulfide-isomerase LQY1, chloroplastic uncharacterized LOC11431794 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein SPA, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein disulfide-isomerase LQY1, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein enabled homolog protein disulfide-isomerase LQY1, chloroplastic formin-like protein 5 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 4
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 3
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 3
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo00190 Oxidative phosphorylation 2
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 3
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot00010 Glycolysis / Gluconeogenesis 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 6
bdi01200 Carbon metabolism 6
bdi00710 Carbon fixation by Calvin cycle 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823519 103848047 111211609 106347700 107954230 107953145 102619544 100305836 100244480 7478596 11431794 101260110 102602654 4326942 103636608 123070929 123062196 123079316 123444524 8072130 100843465 5718924
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